Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.39□□□□□ -1.87
ZIC3O60481 RNA5SP124-201ENST00000362739 110 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 RNU6-108P-201ENST00000365558 107 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 Y_RNA.372-201ENST00000365599 102 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
ZIC3O60481 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZIC3O60481 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 SNORA11-201ENST00000408789 128 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.39□□□□□ -1.87
ZIC3O60481 UBE2FP1-201ENST00000416536 447 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.39□□□□□ -1.87
ZIC3O60481 AL121871.1-201ENST00000443413 436 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 Z99127.3-201ENST00000448158 395 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AC006480.1-201ENST00000449887 378 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 FGF7P6-202ENST00000451282 293 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 SNORA84-201ENST00000459229 133 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AL121769.1-201ENST00000469473 401 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AC069499.1-201ENST00000489433 509 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 AC011979.2-201ENST00000527568 352 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.39□□□□□ -1.87
ZIC3O60481 SUB1P2-201ENST00000556401 297 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.39□□□□□ -1.87
ZIC3O60481 AC012182.1-201ENST00000570133 895 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AC105224.1-201ENST00000587055 421 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.39□□□□□ -1.87
ZIC3O60481 GLUD1P4-201ENST00000590914 418 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.39□□□□□ -1.87
ZIC3O60481 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.39□□□□□ -1.87
ZIC3O60481 AC004696.1-201ENST00000614345 607 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 uc_338.32-201ENST00000615087 172 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AL713922.2-201ENST00000619384 716 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 RMST_9.1-201ENST00000619945 193 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.39□□□□□ -1.87
ZIC3O60481 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.39□□□□□ -1.87
ZIC3O60481 TAB3P1-202ENST00000452645 1634 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZIC3O60481 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.39□□□□□ -1.87
ZIC3O60481 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
ZIC3O60481 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.38□□□□□ -1.87
ZIC3O60481 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZIC3O60481 AC009812.4-201ENST00000569134 1805 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZIC3O60481 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZIC3O60481 SNORD56.2-201ENST00000363242 71 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 RNU6-39P-201ENST00000384344 107 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ZIC3O60481 RNA5SP424-201ENST00000390988 115 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 RNU6-780P-201ENST00000391030 104 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 CIR1P3-201ENST00000405137 479 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AL353193.1-201ENST00000421444 268 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZIC3O60481 DPPA2P1-201ENST00000428060 556 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AC018644.1-201ENST00000429934 551 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.38□□□□□ -1.87
ZIC3O60481 AL662791.1-201ENST00000441992 928 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.38□□□□□ -1.87
ZIC3O60481 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.38□□□□□ -1.87
ZIC3O60481 AC078918.1-201ENST00000498515 228 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.38□□□□□ -1.87
ZIC3O60481 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.38□□□□□ -1.87
ZIC3O60481 ARL2BPP6-201ENST00000512757 439 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 RNU6-718P-201ENST00000516166 105 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 SNORA67.7-201ENST00000516664 135 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 SNORA31.22-201ENST00000517204 135 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.38□□□□□ -1.87
ZIC3O60481 AC100870.1-201ENST00000522035 505 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ZIC3O60481 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.38□□□□□ -1.87
ZIC3O60481 AC123904.3-201ENST00000547218 814 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AC128657.1-201ENST00000549459 145 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 ARL2BPP2-201ENST00000550907 489 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 CBX3P5-201ENST00000552017 521 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.38□□□□□ -1.87
ZIC3O60481 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.38□□□□□ -1.87
ZIC3O60481 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.38□□□□□ -1.87
ZIC3O60481 MIR3158-1-201ENST00000583596 81 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 SNORD84-203ENST00000584275 78 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.38□□□□□ -1.87
ZIC3O60481 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.38□□□□□ -1.87
ZIC3O60481 AC244505.7-201ENST00000599675 272 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AL606834.2-201ENST00000602954 668 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.38□□□□□ -1.87
ZIC3O60481 AC009161.2-201ENST00000624626 138 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 AC012442.3-202ENST00000636742 206 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
ZIC3O60481 ELF2P3-201ENST00000445099 1506 ntBASIC3.38□□□□□ -1.87
ZIC3O60481 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
ZIC3O60481 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZIC3O60481 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZIC3O60481 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZIC3O60481 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZIC3O60481 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZIC3O60481 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms