Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AL136372.1-201ENST00000403060 228 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 AC096664.2-201ENST00000411843 406 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 OR6C66P-201ENST00000414917 930 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 RPL12P46-201ENST00000436610 195 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.25□□□□□ -1.57
GRIN3BO60391 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 SNORD19B-201ENST00000459623 84 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 MTCO1P29-201ENST00000496868 288 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 TTC39CP1-201ENST00000512513 755 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 NARSP2-201ENST00000518524 679 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 AC090136.1-201ENST00000520009 240 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.25□□□□□ -1.57
GRIN3BO60391 IGKV2D-19-201ENST00000523346 262 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GRIN3BO60391 AP005597.4-201ENST00000526762 229 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GRIN3BO60391 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.25□□□□□ -1.57
GRIN3BO60391 AC006272.2-201ENST00000594725 163 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.25□□□□□ -1.57
GRIN3BO60391 AL022099.1-201ENST00000604551 712 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 MIR7975-201ENST00000619350 68 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.25□□□□□ -1.57
GRIN3BO60391 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
GRIN3BO60391 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
GRIN3BO60391 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GRIN3BO60391 AC004944.1-201ENST00000517807 3059 ntBASIC5.25□□□□□ -1.57
GRIN3BO60391 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.24□□□□□ -1.57
GRIN3BO60391 MAPK10-372ENST00000641954 3413 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GRIN3BO60391 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
GRIN3BO60391 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GRIN3BO60391 RNU6-1029P-201ENST00000384109 107 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 RNU6-738P-201ENST00000384531 106 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 Y_RNA.530-201ENST00000384587 101 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.24□□□□□ -1.57
GRIN3BO60391 RPS12P5-201ENST00000423449 371 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
GRIN3BO60391 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.24□□□□□ -1.57
GRIN3BO60391 AC004938.1-201ENST00000438468 308 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 RPL23AP81-201ENST00000455252 467 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 RNU7-180P-201ENST00000459240 63 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.24□□□□□ -1.57
GRIN3BO60391 RNA5SP503-201ENST00000517047 117 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 RPL7P20-201ENST00000520308 745 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 AL133271.1-201ENST00000538229 291 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.24□□□□□ -1.57
GRIN3BO60391 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.24□□□□□ -1.57
GRIN3BO60391 MIR3668-201ENST00000582138 75 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.24□□□□□ -1.57
GRIN3BO60391 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.24□□□□□ -1.57
GRIN3BO60391 AL158196.1-201ENST00000616786 434 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.24□□□□□ -1.57
GRIN3BO60391 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
GRIN3BO60391 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GRIN3BO60391 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.24□□□□□ -1.57
GRIN3BO60391 AL445487.1-201ENST00000415694 1580 ntBASIC5.24□□□□□ -1.57
GRIN3BO60391 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
GRIN3BO60391 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GRIN3BO60391 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
GRIN3BO60391 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
GRIN3BO60391 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIN3BO60391 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GRIN3BO60391 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.23□□□□□ -1.57
GRIN3BO60391 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.23□□□□□ -1.57
GRIN3BO60391 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIN3BO60391 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
GRIN3BO60391 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GRIN3BO60391 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIN3BO60391 RNU5E-6P-201ENST00000365574 115 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 RNVU1-14-201ENST00000384770 164 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 AL359634.1-202ENST00000404721 284 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 RNU4-6P-201ENST00000410804 122 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 AC008065.1-201ENST00000428525 348 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 AC005094.1-201ENST00000440420 368 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIN3BO60391 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.23□□□□□ -1.57
GRIN3BO60391 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.23□□□□□ -1.57
GRIN3BO60391 RNA5SP246-201ENST00000458909 119 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 ST13P14-201ENST00000474095 734 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIN3BO60391 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIN3BO60391 RNU6-64P-201ENST00000517119 105 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.23□□□□□ -1.57
GRIN3BO60391 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.23□□□□□ -1.57
GRIN3BO60391 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.23□□□□□ -1.57
GRIN3BO60391 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.23□□□□□ -1.57
GRIN3BO60391 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
GRIN3BO60391 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.23□□□□□ -1.57
GRIN3BO60391 AL592436.1-201ENST00000605135 558 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 AC134503.1-201ENST00000633048 54 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 AP004289.2-201ENST00000444413 1457 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIN3BO60391 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIN3BO60391 AC116667.1-201ENST00000604855 2072 ntBASIC5.23□□□□□ -1.57
GRIN3BO60391 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIN3BO60391 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIN3BO60391 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GRIN3BO60391 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms