Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.23□□□□□ -2.05
SGCEO43556 AC006518.2-201ENST00000542513 940 ntBASIC2.23□□□□□ -2.05
SGCEO43556 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.23□□□□□ -2.05
SGCEO43556 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.23□□□□□ -2.05
SGCEO43556 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.23□□□□□ -2.05
SGCEO43556 MIR4789-201ENST00000577469 82 ntBASIC2.23□□□□□ -2.05
SGCEO43556 MIR4658-201ENST00000584344 65 ntBASIC2.23□□□□□ -2.05
SGCEO43556 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.23□□□□□ -2.05
SGCEO43556 AC093838.1-201ENST00000613014 469 ntBASIC2.23□□□□□ -2.05
SGCEO43556 AC004009.2-201ENST00000623016 728 ntBASIC2.23□□□□□ -2.05
SGCEO43556 U6.101-201ENST00000637707 76 ntBASIC2.23□□□□□ -2.05
SGCEO43556 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SGCEO43556 AL137003.2-201ENST00000606924 2538 ntBASIC2.22□□□□□ -2.05
SGCEO43556 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SGCEO43556 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SGCEO43556 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SGCEO43556 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SGCEO43556 MIR34A-201ENST00000385130 110 ntBASIC2.22□□□□□ -2.05
SGCEO43556 AL122016.1-201ENST00000403365 367 ntBASIC2.22□□□□□ -2.05
SGCEO43556 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.22□□□□□ -2.05
SGCEO43556 MTND2P5-201ENST00000432656 1006 ntBASIC2.22□□□□□ -2.05
SGCEO43556 AC104389.3-201ENST00000445629 235 ntBASIC2.22□□□□□ -2.05
SGCEO43556 BMI1P1-201ENST00000445879 941 ntBASIC2.22□□□□□ -2.05
SGCEO43556 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.22□□□□□ -2.05
SGCEO43556 AL353691.1-201ENST00000451332 387 ntBASIC2.22□□□□□ -2.05
SGCEO43556 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.22□□□□□ -2.05
SGCEO43556 AC114322.1-201ENST00000506771 926 ntBASIC2.22□□□□□ -2.05
SGCEO43556 AC010460.2-201ENST00000509054 677 ntBASIC2.22□□□□□ -2.05
SGCEO43556 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.22□□□□□ -2.05
SGCEO43556 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.22□□□□□ -2.05
SGCEO43556 SCARNA15.2-201ENST00000516409 127 ntBASIC2.22□□□□□ -2.05
SGCEO43556 AC026616.1-201ENST00000523157 525 ntBASIC2.22□□□□□ -2.05
SGCEO43556 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.22□□□□□ -2.05
SGCEO43556 AC124947.2-202ENST00000552735 133 ntBASIC2.22□□□□□ -2.05
SGCEO43556 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SGCEO43556 AC025281.1-201ENST00000567026 265 ntBASIC2.22□□□□□ -2.05
SGCEO43556 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.22□□□□□ -2.05
SGCEO43556 MIR4319-201ENST00000577285 85 ntBASIC2.22□□□□□ -2.05
SGCEO43556 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.22□□□□□ -2.05
SGCEO43556 AP001542.2-201ENST00000593141 364 ntBASIC2.22□□□□□ -2.05
SGCEO43556 RPAP2P1-201ENST00000603626 1168 ntBASIC2.22□□□□□ -2.05
SGCEO43556 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.22□□□□□ -2.05
SGCEO43556 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.22□□□□□ -2.05
SGCEO43556 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SGCEO43556 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SGCEO43556 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SGCEO43556 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SGCEO43556 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.21□□□□□ -2.06
SGCEO43556 HMGB1P5-201ENST00000255320 642 ntBASIC2.21□□□□□ -2.06
SGCEO43556 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SGCEO43556 SUGT1P1-201ENST00000379514 476 ntBASIC2.21□□□□□ -2.06
SGCEO43556 MIR196B-201ENST00000384852 84 ntBASIC2.21□□□□□ -2.06
SGCEO43556 RNA5SP184-201ENST00000411071 108 ntBASIC2.21□□□□□ -2.06
SGCEO43556 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.21□□□□□ -2.06
SGCEO43556 AF274854.1-201ENST00000413236 615 ntBASIC2.21□□□□□ -2.06
SGCEO43556 AC091390.3-201ENST00000426478 338 ntBASIC2.21□□□□□ -2.06
SGCEO43556 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.21□□□□□ -2.06
SGCEO43556 GTF2IP20-201ENST00000431663 360 ntBASIC2.21□□□□□ -2.06
SGCEO43556 AC092393.1-201ENST00000439625 742 ntBASIC2.21□□□□□ -2.06
SGCEO43556 DPPA3P1-201ENST00000448050 469 ntBASIC2.21□□□□□ -2.06
SGCEO43556 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SGCEO43556 AC133134.1-201ENST00000466800 359 ntBASIC2.21□□□□□ -2.06
SGCEO43556 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.21□□□□□ -2.06
SGCEO43556 FAM172BP-201ENST00000487497 1089 ntBASIC2.21□□□□□ -2.06
SGCEO43556 EIF4EP3-201ENST00000498782 656 ntBASIC2.21□□□□□ -2.06
SGCEO43556 RNA5SP356-201ENST00000515972 94 ntBASIC2.21□□□□□ -2.06
SGCEO43556 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.21□□□□□ -2.06
SGCEO43556 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.21□□□□□ -2.06
SGCEO43556 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.21□□□□□ -2.06
SGCEO43556 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.21□□□□□ -2.06
SGCEO43556 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.21□□□□□ -2.06
SGCEO43556 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
SGCEO43556 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.21□□□□□ -2.06
SGCEO43556 AL160281.1-201ENST00000605307 311 ntBASIC2.21□□□□□ -2.06
SGCEO43556 AP001521.1-201ENST00000609150 300 ntBASIC2.21□□□□□ -2.06
SGCEO43556 AL445493.3-201ENST00000619568 477 ntBASIC2.21□□□□□ -2.06
SGCEO43556 AC007785.2-201ENST00000598627 1916 ntBASIC2.21□□□□□ -2.06
SGCEO43556 AC097714.1-201ENST00000511272 1647 ntBASIC2.2□□□□□ -2.06
SGCEO43556 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SGCEO43556 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SGCEO43556 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SGCEO43556 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SGCEO43556 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SGCEO43556 SNORA5B-201ENST00000363786 132 ntBASIC2.2□□□□□ -2.06
SGCEO43556 RN7SKP226-201ENST00000364912 300 ntBASIC2.2□□□□□ -2.06
SGCEO43556 MIR514A1-201ENST00000385133 98 ntBASIC2.2□□□□□ -2.06
SGCEO43556 U3.26-201ENST00000391236 204 ntBASIC2.2□□□□□ -2.06
SGCEO43556 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.2□□□□□ -2.06
SGCEO43556 AC018630.2-202ENST00000422992 927 ntBASIC2.2□□□□□ -2.06
SGCEO43556 MTCYBP32-201ENST00000427945 1084 ntBASIC2.2□□□□□ -2.06
SGCEO43556 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.2□□□□□ -2.06
SGCEO43556 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.2□□□□□ -2.06
SGCEO43556 RSL24D1P8-201ENST00000434442 492 ntBASIC2.2□□□□□ -2.06
SGCEO43556 RPS12P2-201ENST00000439728 269 ntBASIC2.2□□□□□ -2.06
SGCEO43556 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.2□□□□□ -2.06
SGCEO43556 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SGCEO43556 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.2□□□□□ -2.06
SGCEO43556 AC008379.1-201ENST00000463655 464 ntBASIC2.2□□□□□ -2.06
SGCEO43556 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SGCEO43556 NDUFB4P2-201ENST00000509515 391 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms