Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SOX1O00570 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SOX1O00570 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX1O00570 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 DDX10P1-201ENST00000448545 1933 ntBASIC5.17□□□□□ -1.58
SOX1O00570 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SOX1O00570 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX1O00570 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX1O00570 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX1O00570 AC093775.1-201ENST00000624154 1868 ntBASIC5.16□□□□□ -1.58
SOX1O00570 MAPK10-338ENST00000641647 3362 ntBASIC5.16□□□□□ -1.58
SOX1O00570 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX1O00570 RNU6-701P-201ENST00000384059 107 ntBASIC5.16□□□□□ -1.58
SOX1O00570 Y_RNA.447-201ENST00000384184 113 ntBASIC5.16□□□□□ -1.58
SOX1O00570 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX1O00570 DPPA2P2-201ENST00000418220 897 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC243428.1-201ENST00000421099 264 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC099336.2-201ENST00000422457 254 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AL645568.3-201ENST00000433683 316 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC073465.2-201ENST00000440938 498 ntBASIC5.16□□□□□ -1.58
SOX1O00570 RPS3AP12-201ENST00000443616 753 ntBASIC5.16□□□□□ -1.58
SOX1O00570 OSTCP8-201ENST00000445117 448 ntBASIC5.16□□□□□ -1.58
SOX1O00570 RPS24P6-201ENST00000452670 400 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC234775.1-201ENST00000454247 670 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC007967.1-201ENST00000455422 1159 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC099560.2-201ENST00000457554 255 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC068781.1-201ENST00000488231 618 ntBASIC5.16□□□□□ -1.58
SOX1O00570 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.16□□□□□ -1.58
SOX1O00570 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.16□□□□□ -1.58
SOX1O00570 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.16□□□□□ -1.58
SOX1O00570 AC097486.1-201ENST00000515331 210 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.16□□□□□ -1.58
SOX1O00570 AL031176.1-201ENST00000604554 466 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC007179.3-201ENST00000604976 235 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC091979.2-201ENST00000607514 214 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC006329.2-201ENST00000611491 394 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AL359547.2-201ENST00000615810 418 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AP005019.3-201ENST00000620418 560 ntBASIC5.16□□□□□ -1.58
SOX1O00570 AC078938.1-201ENST00000620993 318 ntBASIC5.16□□□□□ -1.58
SOX1O00570 MIR8062-201ENST00000621515 85 ntBASIC5.16□□□□□ -1.58
SOX1O00570 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX1O00570 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SOX1O00570 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX1O00570 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SOX1O00570 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SOX1O00570 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SOX1O00570 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.15□□□□□ -1.58
SOX1O00570 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SOX1O00570 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.15□□□□□ -1.58
SOX1O00570 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SOX1O00570 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SOX1O00570 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.15□□□□□ -1.58
SOX1O00570 MTND5P7-201ENST00000413558 1798 ntBASIC5.15□□□□□ -1.58
SOX1O00570 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.15□□□□□ -1.58
SOX1O00570 Y_RNA.288-201ENST00000364854 92 ntBASIC5.15□□□□□ -1.59
SOX1O00570 RN7SKP186-201ENST00000365371 303 ntBASIC5.15□□□□□ -1.59
SOX1O00570 MIR491-201ENST00000384877 84 ntBASIC5.15□□□□□ -1.59
SOX1O00570 MIR200C-201ENST00000384980 68 ntBASIC5.15□□□□□ -1.59
SOX1O00570 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.15□□□□□ -1.59
SOX1O00570 AL357515.1-201ENST00000402967 542 ntBASIC5.15□□□□□ -1.59
SOX1O00570 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX1O00570 RPL23AP93-201ENST00000440847 484 ntBASIC5.15□□□□□ -1.59
SOX1O00570 NOTCH2P1-201ENST00000443481 624 ntBASIC5.15□□□□□ -1.59
SOX1O00570 GAPDHP27-201ENST00000447427 1020 ntBASIC5.15□□□□□ -1.59
SOX1O00570 AC112492.4-201ENST00000456549 352 ntBASIC5.15□□□□□ -1.59
SOX1O00570 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.15□□□□□ -1.59
SOX1O00570 AC087884.1-201ENST00000469738 328 ntBASIC5.15□□□□□ -1.59
SOX1O00570 AC010631.1-201ENST00000474150 156 ntBASIC5.15□□□□□ -1.59
SOX1O00570 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX1O00570 AC009901.1-201ENST00000506703 541 ntBASIC5.15□□□□□ -1.59
SOX1O00570 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX1O00570 AC091868.1-201ENST00000508746 304 ntBASIC5.15□□□□□ -1.59
SOX1O00570 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX1O00570 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.15□□□□□ -1.59
SOX1O00570 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.15□□□□□ -1.59
SOX1O00570 HSBP1P1-201ENST00000555205 166 ntBASIC5.15□□□□□ -1.59
SOX1O00570 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.15□□□□□ -1.59
SOX1O00570 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SOX1O00570 AC011471.1-201ENST00000585766 187 ntBASIC5.15□□□□□ -1.59
SOX1O00570 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.15□□□□□ -1.59
SOX1O00570 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SOX1O00570 SNORD58B-201ENST00000607313 66 ntBASIC5.15□□□□□ -1.59
SOX1O00570 AL022401.1-201ENST00000619498 108 ntBASIC5.15□□□□□ -1.59
SOX1O00570 MIR3653-201ENST00000625572 110 ntBASIC5.15□□□□□ -1.59
SOX1O00570 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX1O00570 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
SOX1O00570 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX1O00570 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.15□□□□□ -1.59
SOX1O00570 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SOX1O00570 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SOX1O00570 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SOX1O00570 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SOX1O00570 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SOX1O00570 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SOX1O00570 AC000374.1-201ENST00000434698 1745 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms