Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL049779.4-201ENST00000604500 156 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AC007179.3-201ENST00000604976 235 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AC009570.1-201ENST00000609599 745 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.93□□□□□ -1.94
PDLIM1O00151 AC002550.2-201ENST00000621246 394 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AL356596.1-201ENST00000624230 379 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AC009039.2-201ENST00000624524 529 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.93□□□□□ -1.94
PDLIM1O00151 FO624990.1-201ENST00000636373 85 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.93□□□□□ -1.94
PDLIM1O00151 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDLIM1O00151 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDLIM1O00151 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PDLIM1O00151 RNU6-1214P-201ENST00000363650 109 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 RNU6-931P-201ENST00000363850 107 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 RNU6-777P-201ENST00000364265 104 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 SNORA70.4-201ENST00000365509 134 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 RNU6-744P-201ENST00000365557 107 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 RNU1-138P-201ENST00000384093 164 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 RNU6-1316P-201ENST00000384242 108 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 RNU6-253P-201ENST00000384730 105 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 RPS4XP3-201ENST00000398541 413 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PDLIM1O00151 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.92□□□□□ -1.94
PDLIM1O00151 RPS15AP38-201ENST00000413110 372 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AL451074.5-201ENST00000415894 435 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.92□□□□□ -1.94
PDLIM1O00151 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
PDLIM1O00151 AC010099.3-201ENST00000423896 409 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.92□□□□□ -1.94
PDLIM1O00151 AL354941.1-201ENST00000438600 464 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 LSM1P1-201ENST00000438629 273 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AL117351.1-201ENST00000438864 766 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.92□□□□□ -1.94
PDLIM1O00151 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.92□□□□□ -1.94
PDLIM1O00151 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.92□□□□□ -1.94
PDLIM1O00151 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.92□□□□□ -1.94
PDLIM1O00151 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PDLIM1O00151 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.92□□□□□ -1.94
PDLIM1O00151 AL109741.2-201ENST00000455561 343 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 snoU13.22-201ENST00000459428 104 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.92□□□□□ -1.94
PDLIM1O00151 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.92□□□□□ -1.94
PDLIM1O00151 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.92□□□□□ -1.94
PDLIM1O00151 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.92□□□□□ -1.94
PDLIM1O00151 AC034159.1-201ENST00000513885 583 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 SNORA3.4-201ENST00000515969 96 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 RN7SKP287-201ENST00000516546 266 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 MRPS36P3-201ENST00000519284 130 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.92□□□□□ -1.94
PDLIM1O00151 AP000857.1-201ENST00000532151 543 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AC125611.2-201ENST00000551907 647 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 RPL21P12-201ENST00000559810 515 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 ZNF415P1-201ENST00000582279 1166 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.92□□□□□ -1.94
PDLIM1O00151 CKS1BP3-201ENST00000600888 237 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AL031985.2-201ENST00000600955 480 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AC093424.1-201ENST00000604999 338 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AC073657.2-201ENST00000605661 303 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 uc_338.25-201ENST00000613756 156 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AC079395.3-201ENST00000615161 484 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.92□□□□□ -1.94
PDLIM1O00151 AC021755.4-201ENST00000616620 456 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AP003122.6-201ENST00000623831 495 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AC007490.1-201ENST00000624321 703 ntBASIC2.92□□□□□ -1.94
PDLIM1O00151 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.92□□□□□ -1.94
PDLIM1O00151 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDLIM1O00151 AC233263.6-201ENST00000631132 1963 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PDLIM1O00151 SNORD113-6-201ENST00000363345 75 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 RNU6-723P-201ENST00000383973 107 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 SNORA1.3-201ENST00000384676 136 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PDLIM1O00151 FO393413.1-201ENST00000402892 195 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 RNA5SP120-201ENST00000410900 112 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 AL035407.1-201ENST00000429211 571 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM1O00151 OR4K11P-201ENST00000431829 904 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM1O00151 Z75741.1-201ENST00000446793 314 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.91□□□□□ -1.94
PDLIM1O00151 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.91□□□□□ -1.94
PDLIM1O00151 AC073901.1-201ENST00000462471 408 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 RPL32P34-201ENST00000486380 400 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 AC021678.1-201ENST00000505195 936 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM1O00151 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.91□□□□□ -1.94
PDLIM1O00151 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM1O00151 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PDLIM1O00151 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM1O00151 AC023538.1-201ENST00000534576 736 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.91□□□□□ -1.94
PDLIM1O00151 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM1O00151 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM1O00151 AP001429.1-201ENST00000602568 530 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM1O00151 AC012468.1-201ENST00000604888 430 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 AL158211.4-201ENST00000606988 584 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.91□□□□□ -1.94
PDLIM1O00151 AP002826.1-201ENST00000608835 315 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms