Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 RPS27P27-201ENST00000498779 255 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 KLHL2P1-201ENST00000508691 521 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC098799.2-201ENST00000509466 868 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNY4P37-201ENST00000516225 96 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-56P-201ENST00000516986 93 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AP001189.2-201ENST00000527320 189 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 ZNF705CP-201ENST00000530515 889 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC023538.1-201ENST00000534576 736 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC061975.8-201ENST00000587058 721 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC234772.3-201ENST00000602277 528 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC090116.1-201ENST00000615679 446 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC006927.4-201ENST00000639187 543 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC092593.1-201ENST00000515413 1815 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 Y_RNA.25-201ENST00000362528 102 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 Y_RNA.465-201ENST00000384293 102 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 TMSB4XP8-201ENST00000402089 135 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNA5SP56-201ENST00000410277 118 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU2-28P-201ENST00000410457 189 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-1077P-201ENST00000410506 102 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 TMSB4XP6-201ENST00000415187 135 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 TMSB4XP1-201ENST00000424567 135 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 MTND1P32-201ENST00000433043 938 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 MTCO2P25-201ENST00000447065 681 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC009961.3-201ENST00000449832 765 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL445669.2-201ENST00000454425 421 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC027673.1-201ENST00000456245 405 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 snoU13.3-201ENST00000459441 104 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 MTCYBP17-201ENST00000503579 789 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 HSPE1P23-201ENST00000509838 286 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC116353.3-201ENST00000511215 249 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC023050.2-201ENST00000544968 387 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 SNRPGP15-201ENST00000600149 222 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 BDH2P1-201ENST00000602288 736 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC025588.2-201ENST00000604851 466 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC131235.4-201ENST00000609288 620 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL139418.1-201ENST00000613613 177 ntBASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
TMX2-CTNND1H3BSU7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-157P-201ENST00000383957 107 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-339P-201ENST00000384310 107 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL023807.1-201ENST00000407932 359 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL008987.1-201ENST00000415528 237 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL035410.1-201ENST00000427409 427 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 ST13P20-201ENST00000447996 1065 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 USP9YP34-201ENST00000453983 808 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC003982.1-202ENST00000469928 248 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC128713.1-201ENST00000471495 306 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 HSPE1P6-201ENST00000479457 291 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 ARL4AP2-201ENST00000507378 601 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC006499.2-201ENST00000513470 337 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 RN7SKP287-201ENST00000516546 266 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 SLC2A13P1-201ENST00000531560 322 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 LSM6P2-201ENST00000552208 177 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC007954.1-201ENST00000554198 494 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms