Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC136443.5-201ENST00000603741 370 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC026741.1-201ENST00000605892 482 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC096586.1-201ENST00000610267 561 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 RNU6-883P-201ENST00000384597 107 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 MTND4LP7-201ENST00000431728 294 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 KATNBL1P3-201ENST00000443475 909 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 MTND2P6-201ENST00000455337 1030 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 GTF2IP12-201ENST00000456547 356 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC010683.1-201ENST00000473673 378 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 RPL21P47-201ENST00000483696 477 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC008885.2-201ENST00000509506 930 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 MIR1264-201ENST00000616374 69 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC022079.2-201ENST00000619739 566 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 RNU6-53P-201ENST00000365367 106 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 RNU6-174P-201ENST00000410406 106 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 UBE2V1P11-201ENST00000411559 285 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 XKRYP4-201ENST00000414395 483 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 XKRYP5-201ENST00000449659 483 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 RPS15AP1-201ENST00000457423 391 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 RPL37P6-202ENST00000464216 403 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AC034244.1-201ENST00000507687 207 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AC109464.2-201ENST00000510242 943 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 HMGN1P28-201ENST00000521340 364 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AC008015.1-201ENST00000555505 465 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AC073111.2-201ENST00000605657 1075 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 OR10AB1P-201ENST00000609613 938 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 AP003072.4-201ENST00000624580 310 ntBASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL6A6A6NMZ7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
COL6A6A6NMZ7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 RNA5SP138-201ENST00000365098 114 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 RAD23BP2-201ENST00000416003 1207 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 RPL7P29-201ENST00000437151 728 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 USP9YP15-201ENST00000442391 422 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 OR51B8P-201ENST00000449892 769 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC104472.2-201ENST00000469035 601 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC078918.1-201ENST00000498515 228 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 GZMAP1-201ENST00000503054 631 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC093770.1-201ENST00000511559 571 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC103833.1-201ENST00000517442 172 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AL136520.1-202ENST00000555494 763 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AP000720.1-201ENST00000625091 483 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AL512283.1-201ENST00000606756 1384 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 MTCO3P4-201ENST00000419236 787 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC068135.1-201ENST00000446164 246 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 RNU1-40P-201ENST00000516816 164 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 RNU1-97P-201ENST00000516872 164 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC104986.1-201ENST00000517978 436 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC026616.1-201ENST00000523157 525 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 SMARCE1P4-201ENST00000523647 241 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC015720.1-201ENST00000565251 277 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC068620.3-201ENST00000602749 560 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC010200.2-201ENST00000605098 235 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 VIS1.1-201ENST00000610517 203 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms