Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 RPS3AP23-202ENST00000574601 686 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 SNORD53-201ENST00000579969 78 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AL020997.3-201ENST00000602843 359 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC009314.1-201ENST00000603871 304 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC002487.1-201ENST00000604565 994 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AL121917.1-203ENST00000605534 577 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC010378.1-201ENST00000619270 362 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AL590396.2-201ENST00000636511 1041 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AP006437.1-201ENST00000641440 3685 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.65□□□□□ -2.14
TRAV3A0A0B4J244 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
TRAV3A0A0B4J244 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 RN7SKP192-201ENST00000411291 327 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL139156.1-201ENST00000412785 841 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 MTND1P23-201ENST00000416931 372 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 Z75741.2-201ENST00000417272 1167 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 OR4K11P-201ENST00000431829 904 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL445687.1-201ENST00000439946 251 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL929288.2-201ENST00000446368 407 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 DPPA3P1-201ENST00000448050 469 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 MTND5P8-201ENST00000449817 1083 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 Z82190.1-201ENST00000454534 490 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 PNPLA4P1-201ENST00000458328 305 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 RNU7-23P-201ENST00000459465 62 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC093767.1-201ENST00000504523 156 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 ARL2BPP5-201ENST00000523141 481 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC068339.2-201ENST00000534395 618 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC009063.1-201ENST00000563342 702 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC106734.1-201ENST00000568646 663 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 MIR4658-201ENST00000584344 65 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 MIR4298-201ENST00000584380 73 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL136363.1-201ENST00000605349 337 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC013412.1-201ENST00000610687 192 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 MIR6840-201ENST00000611937 71 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL450472.3-201ENST00000615578 367 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL590808.1-201ENST00000618696 141 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AL356585.4-201ENST00000623078 1229 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 AC079597.1-201ENST00000624306 508 ntBASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
TRAV3A0A0B4J244 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC022336.2-201ENST00000568966 2538 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 RNU6-251P-201ENST00000363235 104 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC098614.2-201ENST00000426040 255 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AL121871.1-201ENST00000443413 436 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 MTCYBP3-201ENST00000445588 1137 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 MTND2P6-201ENST00000455337 1030 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 RNU6-798P-201ENST00000516912 103 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AP001317.1-201ENST00000531194 960 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC233266.2-201ENST00000567067 528 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 BPTFP1-201ENST00000579209 492 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 SNRPGP19-201ENST00000603826 189 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC079791.1-201ENST00000605356 973 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 Y_RNA.783-201ENST00000613546 102 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC004852.3-201ENST00000614131 326 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC079395.3-201ENST00000615161 484 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AL162233.1-201ENST00000620014 944 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 MIR6873-201ENST00000622788 63 ntBASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV3A0A0B4J244 MTND4P35-201ENST00000604257 1375 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 RNU1-73P-201ENST00000383971 164 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 SNORA51.6-201ENST00000384151 125 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms