Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC099654.13-201ENST00000639774 207 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 NUP58P1-201ENST00000502546 1738 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AL049780.3-201ENST00000624612 1583 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 MFSD8-233ENST00000641482 4860 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 RNA5SP295-201ENST00000362655 121 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 RNU6-809P-201ENST00000384461 107 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 RNU6-878P-201ENST00000384578 110 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 MIR184-201ENST00000384962 84 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 SNORA40.3-201ENST00000390964 122 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 U3.29-201ENST00000391296 212 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 BX323014.1-201ENST00000412876 237 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 TOMM22P1-201ENST00000418578 312 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC002075.2-201ENST00000425207 252 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 MTCO3P30-201ENST00000426425 670 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 RPS29P31-201ENST00000446147 164 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 USP9YP12-201ENST00000450481 570 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AL590365.1-201ENST00000450788 243 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC008155.2-201ENST00000464337 397 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 FAM172BP-201ENST00000487497 1089 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC093331.1-201ENST00000521474 169 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC009063.1-201ENST00000563342 702 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 MIR4738-201ENST00000579134 87 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC067852.3-201ENST00000589177 561 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AP003465.2-201ENST00000602571 373 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 BBIP1P1-201ENST00000602999 279 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC112191.3-201ENST00000604371 277 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AL365503.1-201ENST00000605247 905 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AL513477.2-201ENST00000607858 568 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AC006566.1-201ENST00000608943 513 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX9Q9Y5X1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC092447.7-201ENST00000422212 1621 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC032011.1-201ENST00000611703 1549 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 RNU1-33P-201ENST00000364249 162 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 RNA5SP72-201ENST00000364442 117 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 RNU6-533P-201ENST00000384144 107 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 RNU6-1215P-201ENST00000384441 102 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 Y_RNA.516-201ENST00000384541 124 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 RNU6-648P-201ENST00000410190 107 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 RNA5SP56-201ENST00000410277 118 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC007390.1-201ENST00000415722 356 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC104651.1-201ENST00000427559 735 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AP000907.1-201ENST00000428428 510 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 SETP5-201ENST00000437270 562 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 DNAJC19P4-201ENST00000440115 345 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AL357552.1-201ENST00000445254 415 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AL033528.1-201ENST00000453780 140 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 RPS4XP10-201ENST00000465034 731 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC104563.1-201ENST00000476147 376 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 HMGB3P15-201ENST00000507326 574 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC109464.2-201ENST00000510242 943 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 FCF1P8-201ENST00000510322 597 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AL117351.2-201ENST00000513571 157 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 MTND4LP18-201ENST00000526864 291 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms