Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RPL30P5-201ENST00000494923 336 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC117522.1-201ENST00000509821 380 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU7-143P-201ENST00000516781 65 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC004024.1-201ENST00000549244 247 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC093227.2-201ENST00000589357 285 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC146944.4-201ENST00000602697 718 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC008638.3-201ENST00000603341 463 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC013562.2-201ENST00000611632 603 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC007998.5-201ENST00000622938 237 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC091905.1-201ENST00000624400 311 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC009161.2-201ENST00000624626 138 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 CUL1P1-201ENST00000509510 2425 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 ZNF807-201ENST00000328088 1707 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 Y_RNA.3-201ENST00000362331 103 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-1215P-201ENST00000384441 102 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 FAT1P1-201ENST00000406588 507 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU4-55P-201ENST00000410731 137 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 HSPE1P12-201ENST00000412576 301 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 CYP4F29P-201ENST00000420685 446 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 DPPA2P1-201ENST00000428060 556 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 MTND3P21-201ENST00000433774 331 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 RPS20P5-201ENST00000434808 360 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AC002486.1-201ENST00000435098 391 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AL353748.1-201ENST00000440753 474 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 NEFMP1-201ENST00000443423 1006 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 MIR5684-201ENST00000585074 65 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AC080078.2-201ENST00000603766 501 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AC007684.1-201ENST00000609671 477 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AL158209.2-201ENST00000619266 216 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 ZNF962P-201ENST00000443465 3140 ntBASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.54□□□□□ -1.68
COL4A3BPQ9Y5P4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 RNA5SP295-201ENST00000362655 121 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AL358472.1-201ENST00000431295 329 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AL451074.3-201ENST00000437709 472 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-953P-201ENST00000459154 107 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 RPL9P6-201ENST00000492764 598 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AP006587.4-201ENST00000526053 529 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AC013553.2-201ENST00000604244 589 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AC104662.1-201ENST00000604448 511 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AL390240.1-201ENST00000612950 384 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 AC016588.2-201ENST00000632484 3021 ntBASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A3BPQ9Y5P4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
COL4A3BPQ9Y5P4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 MAPK10-372ENST00000641954 3413 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC118273.1-201ENST00000525324 3006 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 AC066616.2-201ENST00000559334 1481 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 Y_RNA.1-201ENST00000352915 104 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 SNORD35B-201ENST00000363660 87 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 RN7SKP280-201ENST00000364196 304 ntBASIC4.52□□□□□ -1.69
COL4A3BPQ9Y5P4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms