Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 HLA-N-201ENST00000437516 135 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC008628.2-201ENST00000502605 298 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 RNA5SP143-201ENST00000516936 115 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AP004371.1-201ENST00000525240 214 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC093012.1-202ENST00000549403 582 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 NCAPGP2-201ENST00000557911 754 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 RN7SL600P-201ENST00000581811 299 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AF038458.1-201ENST00000588406 262 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL670379.6-201ENST00000603753 252 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL670379.11-201ENST00000604059 253 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC008162.1-201ENST00000604718 254 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL670379.1-201ENST00000604752 252 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL670379.5-201ENST00000605253 252 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL670379.12-201ENST00000605291 253 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL670379.8-201ENST00000605353 252 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL670379.7-201ENST00000605823 252 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC008945.2-201ENST00000606056 604 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 MIR432-201ENST00000606207 94 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 FAM27D1-201ENST00000612308 341 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 MIR7702-201ENST00000621931 59 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AP003122.6-201ENST00000623831 495 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL137003.2-201ENST00000606924 2538 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
PCDHB1Q9Y5F3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHB1Q9Y5F3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHB1Q9Y5F3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHB1Q9Y5F3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 RNU1-14P-201ENST00000362759 152 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-335P-201ENST00000364563 113 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 SNORA23-201ENST00000365128 182 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 MT-TL1-201ENST00000386347 75 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AL583835.1-201ENST00000399570 407 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 TXNP7-201ENST00000406296 293 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 RNU2-36P-201ENST00000410361 191 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 CYCSP19-201ENST00000411715 316 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 SSXP9-201ENST00000417503 292 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 PPP1R11P2-201ENST00000423543 382 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 RPL7P2-201ENST00000427639 268 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC098614.3-201ENST00000438957 440 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 RNU7-182P-201ENST00000459009 62 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC006512.1-201ENST00000468816 291 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC078785.3-201ENST00000476607 425 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AL163973.1-201ENST00000484753 577 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 RN7SL691P-201ENST00000494487 301 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC026427.2-201ENST00000506228 536 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 SNORA20.3-201ENST00000516880 132 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-1092P-201ENST00000516955 87 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 CBX3P5-201ENST00000552017 521 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AL121992.2-201ENST00000606262 256 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC063943.3-201ENST00000615562 356 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC104260.1-201ENST00000616660 539 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 MIR6875-201ENST00000617506 72 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 uc_338.11-201ENST00000619132 160 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC009033.1-201ENST00000624279 431 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC138649.5-201ENST00000637456 137 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 AC008013.2-202ENST00000637965 364 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 TAB3P1-202ENST00000452645 1634 ntBASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms