Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU6-840P-201ENST00000517275 65 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AC008749.1-201ENST00000597650 306 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AC005828.6-201ENST00000606610 232 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AC109309.2-201ENST00000612597 332 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AL591135.1-201ENST00000401578 5914 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 RNA5SP477-201ENST00000362639 119 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 RPL21P67-201ENST00000402896 478 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AC113412.1-201ENST00000425840 504 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AC099677.3-201ENST00000427081 395 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 MTND6P12-201ENST00000428247 522 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AL161636.2-201ENST00000445179 927 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AC016700.2-201ENST00000446011 156 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AC090804.1-201ENST00000448870 490 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AL162739.1-201ENST00000450606 307 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 RN7SL352P-201ENST00000466002 277 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AC005840.1-201ENST00000498412 377 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 HMGB3P16-201ENST00000508037 287 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 RNU6-1315P-201ENST00000517187 99 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 TGIF1P1-201ENST00000558095 802 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 MIR1273C-201ENST00000578669 77 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 MIR4275-201ENST00000636486 87 ntBASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PCDHB3Q9Y5E6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 RNU6-227P-201ENST00000362865 103 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 Y_RNA.357-201ENST00000365487 109 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 MT-TC-201ENST00000387405 66 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 RPS4XP3-201ENST00000398541 413 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 SEPT7P4-201ENST00000437076 306 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 MRPS10P1-201ENST00000448483 130 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AC023141.9-201ENST00000458734 412 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 TOMM22P4-201ENST00000511318 336 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 Y_RNA.667-201ENST00000516212 107 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AL157871.3-201ENST00000557231 293 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 MIR548X2-201ENST00000579776 100 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AC060766.3-201ENST00000591442 263 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AL133393.1-201ENST00000603277 287 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 RPL23AP88-201ENST00000605759 454 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AC023043.4-201ENST00000612081 449 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 MIR6793-201ENST00000612376 63 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AL137067.2-201ENST00000621202 131 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 AC110774.1-201ENST00000623567 2018 ntBASIC5.81□□□□□ -1.48
PCDHB3Q9Y5E6 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB3Q9Y5E6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB3Q9Y5E6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB3Q9Y5E6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB3Q9Y5E6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB3Q9Y5E6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB3Q9Y5E6 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
PCDHB3Q9Y5E6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms