Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL590084.2-201ENST00000401481 382 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 RN7SKP266-201ENST00000410232 287 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC011233.1-201ENST00000422812 283 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 PPP1R11P2-201ENST00000423543 382 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AL035407.1-201ENST00000429211 571 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 RPL23AP22-201ENST00000437556 453 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AL008629.1-201ENST00000438615 184 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 MTCO1P27-201ENST00000448269 226 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC104308.1-201ENST00000454621 333 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 RPL30P14-201ENST00000482744 348 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 RNA5SP217-201ENST00000515959 91 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 SNORA31.22-201ENST00000517204 135 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 RNU6-711P-201ENST00000517255 106 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AP003497.1-201ENST00000528472 562 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 ZNF321P-202ENST00000550843 495 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 SETP2-201ENST00000553886 926 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC009094.1-201ENST00000564443 426 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC024560.3-201ENST00000608482 349 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AL591516.1-201ENST00000611326 274 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC009268.2-201ENST00000621925 457 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC091953.5-201ENST00000622919 233 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AC017037.3-201ENST00000625016 472 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 OR1S2-201ENST00000302592 978 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 Y_RNA.18-201ENST00000362461 102 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 RNU6-853P-201ENST00000364306 107 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 RNA5SP38-201ENST00000410750 119 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 RNU4-47P-201ENST00000410876 114 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC098592.1-201ENST00000419352 333 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC005005.2-201ENST00000420779 380 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 NDUFB4P7-201ENST00000423198 363 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC009969.1-201ENST00000438726 172 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 RN7SL863P-201ENST00000462370 296 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 RPL7P5-201ENST00000471472 736 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC109925.1-201ENST00000478069 331 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 HSPE1P6-201ENST00000479457 291 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 RN7SL504P-201ENST00000494496 287 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 RPL30P5-201ENST00000494923 336 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC093809.1-201ENST00000509155 340 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC090888.2-201ENST00000559765 1144 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 MIR5004-201ENST00000579078 107 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC012493.2-201ENST00000595083 291 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 VN1R92P-201ENST00000598511 928 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 BNIP3P23-201ENST00000599655 511 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC072039.2-201ENST00000608883 439 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC103710.4-201ENST00000609301 899 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC138932.5-201ENST00000617759 563 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 MIR8057-201ENST00000620957 69 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AC008443.7-201ENST00000622195 246 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 AL079305.1-201ENST00000623159 3008 ntBASIC2.98□□□□□ -1.93
ATG4BQ9Y4P1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 RNU6-433P-201ENST00000363216 104 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 U3.11-201ENST00000364476 212 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 RNU6-1078P-201ENST00000364522 103 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 SNORA14A-201ENST00000364773 135 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 RNU6-1197P-201ENST00000391183 107 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 MTCO1P17-201ENST00000411522 491 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 RAP1BP1-201ENST00000412709 553 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 NDUFB4P5-201ENST00000415445 361 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 AL353678.1-201ENST00000422735 741 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 TRIAP1P1-201ENST00000427062 225 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 AL590383.1-201ENST00000428602 75 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 AL512649.1-201ENST00000428997 581 ntBASIC2.97□□□□□ -1.93
ATG4BQ9Y4P1 MTND1P20-201ENST00000430341 950 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms