Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 RNU6-217P-201ENST00000384164 104 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AL122016.1-201ENST00000403365 367 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AL079342.2-201ENST00000403367 482 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 TPMTP3-201ENST00000411928 735 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 RPS7P9-201ENST00000414704 586 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 MTCO2P1-201ENST00000424648 477 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 GTF2IP20-201ENST00000431663 360 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 MTND4P6-201ENST00000438297 472 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 MTND2P20-201ENST00000440805 661 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 CBWD4P-201ENST00000445695 655 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 RPS27AP9-201ENST00000477681 438 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AC138853.1-201ENST00000503549 823 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 TMEM251P1-201ENST00000503717 318 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AC114322.1-201ENST00000506771 926 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 SNORA9.3-201ENST00000516383 129 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 SCARNA13-201ENST00000516672 275 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 RNA5SP471-201ENST00000516971 106 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AC009163.5-201ENST00000575421 637 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 MIR4325-201ENST00000583049 90 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 MIR3605-201ENST00000583214 100 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 MIR3117-201ENST00000584034 78 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 BNIP3P33-201ENST00000598912 569 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AC068880.4-201ENST00000623082 495 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 Z82195.2-201ENST00000612348 18351 ntBASIC2.42□□□□□ -2.02
RHBDD3Q9Y3P4 AL359693.1-201ENST00000614959 2407 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 RNU6-28P-201ENST00000362378 107 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 RNU1-140P-201ENST00000365040 165 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AL450338.1-201ENST00000407987 512 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AC008850.1-201ENST00000427546 362 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 snoU13.22-201ENST00000459428 104 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 NDUFB4P2-201ENST00000509515 391 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AC008837.1-201ENST00000511513 412 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AC091826.1-201ENST00000514065 313 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 RNU1-104P-201ENST00000517280 175 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AC087465.1-201ENST00000560574 245 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 ZNF861P-201ENST00000588126 639 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AL021368.1-201ENST00000607490 540 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AL590099.1-201ENST00000615276 138 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AC008443.7-201ENST00000622195 246 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 AC006378.2-201ENST00000623178 2476 ntBASIC2.41□□□□□ -2.02
RHBDD3Q9Y3P4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.4□□□□□ -2.02
RHBDD3Q9Y3P4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
RHBDD3Q9Y3P4 MCTS2P-201ENST00000394552 546 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 SEPT2P1-201ENST00000419651 180 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 Z82209.1-201ENST00000422141 2135 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 UBE2V1P13-201ENST00000436983 439 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 USP9YP22-201ENST00000438971 294 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 ST13P20-201ENST00000447996 1065 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 RSL24D1P3-201ENST00000449255 495 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 AC009961.3-201ENST00000449832 765 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 MTND1P9-201ENST00000453775 944 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 RBM43P1-201ENST00000476891 1081 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 HIGD1AP17-201ENST00000554576 276 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 AL391261.3-201ENST00000557194 520 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 AL158211.4-201ENST00000606988 584 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms