Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 SNORA75B-201ENST00000384053 137 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 SNORD3H-201ENST00000384486 214 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 Y_RNA.527-201ENST00000384573 102 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AL391417.1-201ENST00000404100 426 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 RN7SKP202-201ENST00000410439 330 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 RNU6-387P-201ENST00000411331 105 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 EIF4A1P3-201ENST00000411521 244 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 SNAP23P1-201ENST00000433229 246 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 RPL12P25-201ENST00000455592 494 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 RPL36AP13-201ENST00000457490 317 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 U8.20-201ENST00000459445 131 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 HMGB1P30-201ENST00000492455 606 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AC008526.1-201ENST00000509149 338 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AL669831.4-202ENST00000590817 238 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AC012443.1-201ENST00000605605 231 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AL138726.1-201ENST00000614873 333 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AC007485.1-201ENST00000616755 206 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 AC010378.1-201ENST00000619270 362 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 MIR8059-201ENST00000620427 81 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 PLCE1P1-201ENST00000622094 305 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 Z95327.2-201ENST00000414579 1873 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 ZNF734P-201ENST00000419494 1534 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 KPNA2P1-201ENST00000458289 1591 ntBASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTCBQ9Y3I0 PNPT1P2-201ENST00000456768 2050 ntBASIC5.71□□□□□ -1.49
RTCBQ9Y3I0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
RTCBQ9Y3I0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
RTCBQ9Y3I0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.71□□□□□ -1.49
RTCBQ9Y3I0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC093775.1-201ENST00000624154 1868 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 CPHL1P-201ENST00000461341 3407 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 RNU6-960P-201ENST00000364056 120 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 RNU6-1078P-201ENST00000364522 103 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 Y_RNA.252-201ENST00000364556 101 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 RNU6-1222P-201ENST00000384615 107 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 SOD2P1-201ENST00000396543 562 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 RNA5SP107-201ENST00000411358 122 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 RPL7P10-201ENST00000417407 739 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC006946.1-201ENST00000429106 328 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC096644.2-201ENST00000429278 159 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 RPL35AP21-201ENST00000437667 333 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC004938.1-201ENST00000438468 308 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC105402.2-201ENST00000438503 358 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC243772.1-201ENST00000451620 410 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 SNORD97-201ENST00000459187 142 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 RN7SL283P-201ENST00000489055 303 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 HIGD1AP13-201ENST00000509878 289 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC006363.1-201ENST00000603806 463 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC025588.3-201ENST00000604182 274 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 DUSP12P1-201ENST00000612874 516 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AL355365.1-201ENST00000616480 294 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 AC112484.5-201ENST00000624189 228 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 MTND5P30-201ENST00000452896 1731 ntBASIC5.71□□□□□ -1.5
RTCBQ9Y3I0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 SNORD3E-201ENST00000362899 217 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 RNA5SP187-201ENST00000384400 119 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 MIR670-201ENST00000390142 98 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 MIR450B-201ENST00000401182 78 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 SNORA11F-201ENST00000408237 128 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 RNU2-21P-201ENST00000410368 188 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 RPL7P28-201ENST00000437739 740 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AL162388.1-201ENST00000450912 352 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 SCARNA18-201ENST00000459004 134 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 RPL21P8-201ENST00000465083 535 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 RN7SL542P-201ENST00000467147 294 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms