Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AC090615.1-201ENST00000577519 154 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 VN1R78P-201ENST00000597393 564 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AL606834.3-201ENST00000602615 496 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AC069234.5-201ENST00000611056 416 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
CDH9Q9ULB4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CDH9Q9ULB4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.84□□□□□ -1.96
CDH9Q9ULB4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDH9Q9ULB4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDH9Q9ULB4 AC012321.1-201ENST00000561622 1588 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 Y_RNA.408-201ENST00000383987 102 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 MIR196B-201ENST00000384852 84 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 SNORA40.2-201ENST00000390847 128 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AL031679.1-201ENST00000400616 525 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AC068533.2-201ENST00000411872 306 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AC236972.1-201ENST00000433225 199 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 UBBP3-201ENST00000445497 241 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AC234775.1-201ENST00000454247 670 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 RPL30P5-201ENST00000494923 336 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 MTCYBP17-201ENST00000503579 789 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AC113347.3-201ENST00000509113 148 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 RNU6-583P-201ENST00000516012 92 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 RNU6-798P-201ENST00000516912 103 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 MIR4672-201ENST00000583126 81 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AL390208.1-201ENST00000605885 644 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AL627309.6-201ENST00000606857 840 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AL450472.3-201ENST00000615578 367 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 ASNSP3-201ENST00000451989 1306 ntBASIC2.83□□□□□ -1.96
CDH9Q9ULB4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CDH9Q9ULB4 TPTE2P4-201ENST00000258589 1605 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 RNU6-28P-201ENST00000362378 107 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 UBE2V1P2-201ENST00000397758 440 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 Z96811.1-201ENST00000445880 108 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 RPL18AP17-201ENST00000455326 198 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 RPL31P50-201ENST00000471002 296 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 UBE2DNL-203ENST00000474922 222 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC093677.1-201ENST00000514414 678 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC087276.1-201ENST00000529659 480 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AP000889.1-201ENST00000530968 660 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AL133271.1-201ENST00000538229 291 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 VN1R83P-201ENST00000595685 445 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AL022067.1-201ENST00000602426 454 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC079089.3-201ENST00000603094 673 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC092574.1-201ENST00000609771 420 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC006213.4-201ENST00000616184 634 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AL158163.2-201ENST00000619110 700 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC092608.2-201ENST00000624427 218 ntBASIC2.82□□□□□ -1.96
CDH9Q9ULB4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CDH9Q9ULB4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 SNORD56.5-201ENST00000364281 72 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 RNA5SP139-201ENST00000364340 117 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 RNU6-76P-201ENST00000384060 104 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 RPS4XP8-201ENST00000402039 771 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 TPMTP2-201ENST00000414372 726 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 RPL23AP11-201ENST00000475260 469 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AC006499.2-201ENST00000513470 337 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 RNA5SP282-201ENST00000516355 108 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 SNORA31.22-201ENST00000517204 135 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms