Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 RNU1-103P-201ENST00000516502 125 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 SNORA31.18-201ENST00000517043 134 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 DEFB108D-201ENST00000527787 222 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC025918.2-201ENST00000558683 763 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 MIR5002-201ENST00000584713 97 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC005498.1-201ENST00000592125 465 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC096586.1-201ENST00000610267 561 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AL137003.2-201ENST00000606924 2538 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 MTND5P6-201ENST00000422338 1798 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 RNU1-73P-201ENST00000383971 164 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 MIR1290-201ENST00000408735 78 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 SDR42E1P3-201ENST00000438345 502 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 IFNA11P-201ENST00000446352 526 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AL929288.2-201ENST00000446368 407 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AL139109.1-201ENST00000455491 297 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AC078857.1-201ENST00000469870 667 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 RNU6-416P-201ENST00000516265 103 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AC106734.1-201ENST00000568646 663 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 MIR4672-201ENST00000583126 81 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AL020997.3-201ENST00000602843 359 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AC245884.12-201ENST00000615364 59 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 AL356585.4-201ENST00000623078 1229 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 CU459211.1-201ENST00000635667 749 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 OR5H6-203ENST00000642105 978 ntBASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS29Q9UBQ0 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 RNU6-1035P-201ENST00000384477 107 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 RNU6-1005P-201ENST00000384519 107 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 RNU4-72P-201ENST00000410754 173 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 OR51A3P-201ENST00000413596 924 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AC024082.2-201ENST00000434771 238 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 TPTE2P1-204ENST00000435256 593 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AL121871.1-201ENST00000443413 436 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AL591719.1-201ENST00000444669 744 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 OR5AK1P-201ENST00000524837 922 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AC026464.5-201ENST00000562497 722 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AC009063.1-201ENST00000563342 702 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AC095057.3-201ENST00000567102 1157 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AC105224.1-201ENST00000587055 421 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 GAS5-AS1-201ENST00000602767 694 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AL356280.1-201ENST00000603614 379 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 AL355877.2-201ENST00000603670 358 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 MIR203B-201ENST00000636080 86 ntBASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS29Q9UBQ0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 SNORD51.1-201ENST00000365405 77 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 PTP4A1P7-201ENST00000423476 514 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 GTF2IP20-201ENST00000431663 360 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms