Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC020893.1-201ENST00000502452 580 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC110768.1-201ENST00000509222 400 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 RANP9-201ENST00000519957 271 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC010928.3-201ENST00000587712 541 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AL034351.1-201ENST00000605288 668 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 U3.45-201ENST00000607547 219 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC007684.1-201ENST00000609671 477 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC019176.2-201ENST00000611579 315 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC006338.1-201ENST00000618453 749 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 CR381653.2-201ENST00000624041 768 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL20A1Q9P218 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL20A1Q9P218 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL20A1Q9P218 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL20A1Q9P218 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL20A1Q9P218 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL20A1Q9P218 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL20A1Q9P218 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC007685.1-201ENST00000329806 452 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL20A1Q9P218 RNU6-1103P-201ENST00000384150 107 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 RNU6-882P-201ENST00000391025 103 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 RNU4-55P-201ENST00000410731 137 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 JKAMPP1-201ENST00000413804 919 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC132479.1-201ENST00000449160 144 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 HMGB3P22-202ENST00000451823 572 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 AL049714.1-201ENST00000466686 347 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL20A1Q9P218 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC021146.1-201ENST00000511202 716 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 SNORA31.20-201ENST00000517111 133 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC090281.1-201ENST00000523019 276 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 MIR3167-201ENST00000579623 85 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC068790.5-201ENST00000602741 355 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC010591.1-201ENST00000603941 649 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC126118.1-201ENST00000607744 628 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC233309.1-201ENST00000619522 751 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 AC243312.2-201ENST00000623340 601 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 MIR6863-201ENST00000636112 90 ntBASIC4.15□□□□□ -1.75
COL20A1Q9P218 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL20A1Q9P218 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL20A1Q9P218 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL20A1Q9P218 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL20A1Q9P218 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL20A1Q9P218 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
COL20A1Q9P218 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL20A1Q9P218 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL20A1Q9P218 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL20A1Q9P218 RNA5SP502-201ENST00000362694 119 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 RNU6-181P-201ENST00000363225 107 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 U3.11-201ENST00000364476 212 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 RNU6-629P-201ENST00000384061 103 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC002486.1-201ENST00000435098 391 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AL451074.3-201ENST00000437709 472 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC004866.2-201ENST00000438285 481 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 NDUFS5P3-201ENST00000450668 321 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC068305.1-201ENST00000497406 726 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 MLLT10P2-201ENST00000506434 249 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AF213884.2-201ENST00000510417 903 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms