Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC034105.4-201ENST00000568304 277 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC005951.2-201ENST00000576282 495 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC006130.2-201ENST00000586202 326 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC090425.2-201ENST00000608818 501 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 U7.8-201ENST00000619968 63 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AF117829.1-206ENST00000621883 3802 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 RNU6-1042P-201ENST00000384204 107 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 MIR493-201ENST00000385254 89 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 USP9YP36-201ENST00000424581 829 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC009961.2-201ENST00000435771 251 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 MTND1P12-201ENST00000455231 147 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC082651.2-201ENST00000496833 166 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 RN7SKP13-201ENST00000515933 244 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 RNA5SP164-201ENST00000516533 110 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 FAM60DP-201ENST00000524174 632 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AP003392.2-201ENST00000527269 208 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AL355836.1-201ENST00000555951 870 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 RPL23AP84-201ENST00000571193 464 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 MIR3921-201ENST00000577308 85 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC087683.1-201ENST00000591187 441 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC104073.3-201ENST00000610942 955 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC004696.1-201ENST00000614345 607 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 SNHG22-203ENST00000617833 660 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC106871.1-201ENST00000568324 3102 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 AC138915.3-201ENST00000562908 1389 ntBASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HCN3Q9P1Z3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 RNY1P12-201ENST00000364251 105 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AL139247.1-201ENST00000422768 325 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 RPL27AP8-201ENST00000424277 446 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AL591419.1-201ENST00000427423 339 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AL451062.2-201ENST00000427515 271 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC137499.1-201ENST00000427602 88 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 USP12PX-201ENST00000432383 1057 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC091435.1-201ENST00000505442 584 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC011979.2-201ENST00000527568 352 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC093012.1-202ENST00000549403 582 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC090877.1-201ENST00000561418 344 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 ZNF192P1-203ENST00000565888 810 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 MIR4293-201ENST00000584305 78 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC004223.2-201ENST00000590309 544 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC079089.3-201ENST00000603094 673 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AL589743.7-201ENST00000612637 233 ntBASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 AC072046.2-201ENST00000618366 268 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms