Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 PRO1804-201ENST00000623780 2050 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RNU6-451P-201ENST00000362921 107 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RNU6-61P-201ENST00000365528 109 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 SOD2P1-201ENST00000396543 562 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 MIR1179-201ENST00000408703 91 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 EIF1P3-201ENST00000423841 334 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RPL7L1P10-201ENST00000427790 463 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AL359265.2-201ENST00000434367 631 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RPL23AP89-201ENST00000439324 255 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 VN1R34P-201ENST00000447387 883 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC073415.1-201ENST00000449240 153 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 DHFRP3-201ENST00000455595 559 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RPS20P20-201ENST00000460498 340 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RPL35AP15-201ENST00000468042 339 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RPL7L1P8-201ENST00000469911 741 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AL049874.1-201ENST00000489560 388 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC108078.2-201ENST00000510750 236 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC074344.1-201ENST00000512823 224 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RNU6-358P-201ENST00000516564 75 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 ZNF192P1-203ENST00000565888 810 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RPL23AP84-201ENST00000571193 464 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RPL23AP87-202ENST00000573039 466 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC067852.3-201ENST00000589177 561 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 BNIP3P30-201ENST00000601184 574 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AL021997.2-201ENST00000615674 271 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 MIR7155-201ENST00000615925 56 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 MIR6719-201ENST00000622428 87 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 DUXAP9-208ENST00000622815 614 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 U6.114-201ENST00000636407 96 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC004972.1-201ENST00000623934 2209 ntBASIC4.27□□□□□ -1.73
MKS1Q9NXB0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MKS1Q9NXB0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 MIR514A1-201ENST00000385133 98 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AL109941.1-201ENST00000401925 229 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 RN7SKP140-201ENST00000411196 284 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AL139413.1-201ENST00000421309 217 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 MTCYBP8-201ENST00000422855 651 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 VDAC1P3-201ENST00000434069 851 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 TXNP1-201ENST00000441872 371 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 NEFMP1-201ENST00000443423 1006 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 MTND1P18-201ENST00000448191 573 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AC092324.1-201ENST00000468671 324 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 RN7SKP219-201ENST00000516825 296 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 RNU6-352P-201ENST00000516908 107 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 NRON-201ENST00000517270 370 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 HIF1AP1-201ENST00000553642 175 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 MIR3921-201ENST00000577308 85 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 DPPA3P3-201ENST00000603842 430 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AL136295.6-201ENST00000610486 658 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 DISC2.1-201ENST00000612827 205 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 U6.42-201ENST00000618440 107 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AC011155.2-201ENST00000623202 216 ntBASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MKS1Q9NXB0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 API5P2-201ENST00000397055 1498 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms