Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 RNU6-798P-201ENST00000516912 103 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 RNA5SP454-201ENST00000517231 127 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 RNU6-988P-201ENST00000519081 107 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AC090136.1-201ENST00000520009 240 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 MTND4P7-201ENST00000523876 130 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AC011979.2-201ENST00000527568 352 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AP000857.1-201ENST00000532151 543 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AL133271.1-201ENST00000538229 291 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 MIR4680-201ENST00000580906 66 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 RN7SL690P-201ENST00000582087 240 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AC073539.2-201ENST00000597113 165 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AC025588.3-201ENST00000604182 274 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AL590099.1-201ENST00000615276 138 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AC119674.1-207ENST00000641355 633 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 MTND5P19-201ENST00000424872 1794 ntBASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PARPBPQ9NWS1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AC079741.1-201ENST00000321498 212 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 Y_RNA.5-201ENST00000362334 102 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 Y_RNA.112-201ENST00000363250 102 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 RNU6-1318P-201ENST00000365389 103 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AL133412.1-201ENST00000380194 2992 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 RNA5SP397-201ENST00000391323 118 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 RPL23AP48-201ENST00000406913 488 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 MIR548F4-201ENST00000408515 105 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 NUP35P1-201ENST00000422734 947 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AC069285.2-201ENST00000440210 275 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AC073264.2-201ENST00000448886 166 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 ELOCP24-201ENST00000456370 334 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AC108059.3-201ENST00000456388 214 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AL139099.1-201ENST00000497398 403 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 Y_RNA.654-201ENST00000497848 106 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 FTH1P24-201ENST00000503502 462 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 RNU7-51P-201ENST00000516560 62 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 RN7SKP295-201ENST00000517264 153 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AP006289.1-201ENST00000538089 277 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 GSTP1P1-201ENST00000548078 319 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AC011477.5-201ENST00000586571 259 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 7SK.7-201ENST00000603504 247 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 AP000843.1-201ENST00000624880 701 ntBASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PARPBPQ9NWS1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 SNORD113.2-201ENST00000364166 89 ntBASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 SNORD115-7-201ENST00000365306 82 ntBASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 SNORA24.1-201ENST00000384401 135 ntBASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 AC119751.6-201ENST00000416712 186 ntBASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 RAC1P6-201ENST00000423911 575 ntBASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 MTCYBP9-201ENST00000431021 303 ntBASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 SNRPEP4-201ENST00000435815 279 ntBASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 ISCUP1-201ENST00000454451 448 ntBASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 DHFRP3-201ENST00000455595 559 ntBASIC4.1□□□□□ -1.75
PARPBPQ9NWS1 SNORD121B-201ENST00000458838 81 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms