Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AL359273.1-201ENST00000510918 627 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC123904.3-201ENST00000547218 814 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC106785.1-201ENST00000565935 262 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AF038458.1-201ENST00000588406 262 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC079089.3-201ENST00000603094 673 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AL136313.1-201ENST00000624804 202 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 RNA5SP196-201ENST00000625967 102 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 SPRR2C-201ENST00000290702 219 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 OR1S2-201ENST00000302592 978 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 MIR1290-201ENST00000408735 78 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 RNU6-628P-201ENST00000410675 107 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 HMGB3P23-201ENST00000414981 585 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AC008850.1-201ENST00000427546 362 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AL117339.2-201ENST00000430475 180 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 RPS24P1-201ENST00000438550 371 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 RN7SKP298-201ENST00000515950 94 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 SNORA70.16-201ENST00000516390 95 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 RNU6-405P-201ENST00000516637 110 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 RNA5SP337-201ENST00000517007 109 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AGGF1P4-201ENST00000568249 801 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AC012213.3-201ENST00000577199 777 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AL139286.2-201ENST00000606838 396 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AC013476.2-201ENST00000614456 459 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 SNHG22-203ENST00000617833 660 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AC006338.1-201ENST00000618453 749 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 MFSD8-236ENST00000641509 4050 ntBASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SLC6A13Q9NSD5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 RNU6-1284P-201ENST00000363701 100 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 RNU4-75P-201ENST00000364621 146 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AL139247.1-201ENST00000422768 325 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC137499.1-201ENST00000427602 88 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AL589823.1-201ENST00000429577 183 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 DLGAP5P1-201ENST00000430307 464 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 USP12PX-201ENST00000432383 1057 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AL662791.1-201ENST00000441992 928 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 USP9YP15-201ENST00000442391 422 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 HSFY6P-201ENST00000445573 403 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 MRPS31P2-201ENST00000451581 518 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC084357.1-201ENST00000473404 255 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 RN7SL323P-201ENST00000494712 295 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 FCF1P3-201ENST00000496394 590 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 GMPSP1-201ENST00000514075 579 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms