Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AP001506.1-201ENST00000615444 211 ntBASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 AL596245.1-201ENST00000618994 362 ntBASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 CR392039.5-201ENST00000623201 510 ntBASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 AP003355.3-201ENST00000623465 114 ntBASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 AC068137.3-201ENST00000639191 341 ntBASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 AC073869.6-201ENST00000640656 341 ntBASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC52A3Q9NQ40 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC032011.1-201ENST00000611703 1549 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RNU6-28P-201ENST00000362378 107 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 Y_RNA.46-201ENST00000362695 102 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RNY4P24-201ENST00000362735 96 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 Y_RNA.234-201ENST00000364409 97 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RNU6-1042P-201ENST00000384204 107 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RNU6-712P-201ENST00000410558 100 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RNU2-71P-201ENST00000411395 189 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RPL23AP82-202ENST00000427528 469 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 SDCBPP1-201ENST00000440192 890 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 FAM103A2P-201ENST00000444122 354 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 snoU109.1-201ENST00000459339 135 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RPL7L1P8-201ENST00000469911 741 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 VN1R17P-201ENST00000472048 1090 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC105252.1-201ENST00000503089 286 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RNU6-1073P-201ENST00000517182 106 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC024224.1-201ENST00000538284 609 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC018630.1-201ENST00000541376 925 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 RPL21P5-201ENST00000554662 472 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 TPMTP1-201ENST00000592307 737 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC090578.1-201ENST00000604955 591 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 AC091925.2-201ENST00000625059 256 ntBASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC52A3Q9NQ40 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 OTUD4P1-201ENST00000237841 3067 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AL161781.1-201ENST00000354277 403 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 RNU6-853P-201ENST00000364306 107 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 RN7SKP226-201ENST00000364912 300 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 RN7SKP156-201ENST00000410308 342 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 FCF1P9-201ENST00000412546 282 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 RPL21P66-201ENST00000426566 466 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 OR2B8P-201ENST00000432841 938 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 VDAC1P3-201ENST00000434069 851 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC009961.2-201ENST00000435771 251 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 CYCSP43-201ENST00000438233 310 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 U3.44-201ENST00000458938 192 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC034222.1-201ENST00000494052 532 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 RPL7P47-201ENST00000497299 556 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 RPL23AP55-201ENST00000498163 452 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC006390.1-201ENST00000508068 283 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 SNORA18.6-201ENST00000516792 115 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 RNU6-430P-201ENST00000517078 107 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 OR5G4P-201ENST00000525251 760 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 OR4P1P-201ENST00000530808 1136 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 AC004024.1-201ENST00000549244 247 ntBASIC3.29□□□□□ -1.88
SLC52A3Q9NQ40 ZNF192P1-203ENST00000565888 810 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms