Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 RN7SKP31-201ENST00000516354 278 ntBASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 CIR1P1-201ENST00000524055 1133 ntBASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 MIR3616-201ENST00000584070 92 ntBASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 RNU1-105P-201ENST00000363470 161 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 RNA5SP252-201ENST00000391131 119 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 FO393413.1-201ENST00000402892 195 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 RNU6-712P-201ENST00000410558 100 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC027124.2-201ENST00000428249 105 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 MTND2P21-201ENST00000436242 1042 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 OR5AQ1P-201ENST00000527596 927 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AL109659.3-201ENST00000624985 950 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 RNU6-1151P-201ENST00000384684 107 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 VTA1P1-201ENST00000414044 866 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 RNF2P1-201ENST00000442955 1010 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AL139109.1-201ENST00000455491 297 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AP002345.1-201ENST00000456493 928 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC084033.1-201ENST00000550830 633 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 NBEAP1-201ENST00000554452 979 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AL049838.1-201ENST00000563647 981 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 APOOP1-201ENST00000604695 592 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AL590099.1-201ENST00000615276 138 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 AL161629.2-201ENST00000615347 275 ntBASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
KIAA1549Q9HCM3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AC007342.9-201ENST00000623877 1385 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AL161781.1-201ENST00000354277 403 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 MIR7-1-201ENST00000384871 110 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 Z86062.1-201ENST00000406773 777 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AC017007.3-201ENST00000479865 435 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 CKS1BP2-201ENST00000497342 240 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 IGKV2D-36-201ENST00000518643 226 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 ERHP1-201ENST00000523006 310 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AL109809.4-201ENST00000603520 2185 ntBASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.69□□□□□ -2.14
KIAA1549Q9HCM3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 RNU2-20P-201ENST00000410425 191 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 MTCO3P12-201ENST00000416718 547 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 MTCO1P57-201ENST00000432182 261 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AL121871.1-201ENST00000443413 436 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 RAD1P2-201ENST00000446414 663 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 MIR5089-201ENST00000580047 84 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 XIAPP1-201ENST00000603162 600 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AL022099.1-201ENST00000604551 712 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 MTND5P31-201ENST00000419366 1374 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AC022336.2-201ENST00000568966 2538 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 SNORA6-201ENST00000384033 151 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms