Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC006329.2-201ENST00000611491 394 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 MIR373-201ENST00000362273 69 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 RNA5SP27-201ENST00000363839 119 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 CYCSP48-201ENST00000417124 323 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC004854.1-201ENST00000440356 349 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC008571.1-201ENST00000467232 300 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 HSPE1P4-201ENST00000550617 308 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AC098679.5-201ENST00000624394 571 ntBASIC1.42□□□□□ -2.18
CHD8Q9HCK8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 MTND5P9-201ENST00000503854 1755 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AL512430.2-201ENST00000406786 339 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 FABP5P6-201ENST00000510588 409 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AP003072.2-201ENST00000527756 676 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 CBX3P8-201ENST00000532412 525 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC107918.3-201ENST00000533272 382 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC004486.1-201ENST00000546846 233 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC007687.1-201ENST00000602704 304 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 BX322635.1-201ENST00000605804 496 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 PABPC1P9-201ENST00000426076 1612 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC002546.1-201ENST00000588041 2504 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC009541.1-201ENST00000438279 2662 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC092638.1-201ENST00000411966 1275 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 HMGB3P31-201ENST00000413333 595 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC233728.2-201ENST00000425348 757 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 MIR3186-201ENST00000577404 85 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 AC146944.4-201ENST00000602697 718 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.41□□□□□ -2.18
CHD8Q9HCK8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHD8Q9HCK8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
CHD8Q9HCK8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CHD8Q9HCK8 RNA5SP181-201ENST00000410246 98 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 OR7L1P-201ENST00000456181 380 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 RNU6-717P-201ENST00000459076 104 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.4□□□□□ -2.19
CHD8Q9HCK8 HMGN1P28-201ENST00000521340 364 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 AC012557.2-201ENST00000605919 418 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 AC007742.2-201ENST00000618226 398 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
CHD8Q9HCK8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.4□□□□□ -2.19
CHD8Q9HCK8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHD8Q9HCK8 Y_RNA.142-201ENST00000363491 102 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 RNU6-670P-201ENST00000364312 104 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHD8Q9HCK8 MIR1265-201ENST00000408444 86 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 RNA5SP338-201ENST00000410495 85 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 AL162388.1-201ENST00000450912 352 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 AL049830.2-201ENST00000480072 201 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.4□□□□□ -2.19
CHD8Q9HCK8 AP003497.1-201ENST00000528472 562 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CHD8Q9HCK8 AL121917.1-203ENST00000605534 577 ntBASIC1.4□□□□□ -2.19
CHD8Q9HCK8 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.4□□□□□ -2.19
CHD8Q9HCK8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHD8Q9HCK8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 MIR4419B-201ENST00000577260 68 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AC060766.3-201ENST00000591442 263 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AC005498.1-201ENST00000592125 465 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AL160237.3-201ENST00000604114 1013 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AF274854.1-201ENST00000413236 615 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 HMGN2P19-201ENST00000425149 265 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 MTCYBP18-201ENST00000501056 747 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AC110792.2-201ENST00000510278 224 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 SNORA31.11-201ENST00000516528 139 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 RNU6-826P-201ENST00000516827 104 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AC087373.1-201ENST00000524920 491 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AC087468.1-201ENST00000604365 630 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 AL020996.3-201ENST00000606617 222 ntBASIC1.39□□□□□ -2.19
CHD8Q9HCK8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.38□□□□□ -2.19
CHD8Q9HCK8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CHD8Q9HCK8 RNU6-984P-201ENST00000363236 109 ntBASIC1.38□□□□□ -2.19
CHD8Q9HCK8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.38□□□□□ -2.19
CHD8Q9HCK8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.38□□□□□ -2.19
CHD8Q9HCK8 TPRKBP1-201ENST00000456243 481 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms