Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC107934.1-201ENST00000522215 217 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AP003122.4-201ENST00000530980 758 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 OR8R1P-201ENST00000543943 764 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC123904.3-201ENST00000547218 814 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 MIR3118-1-201ENST00000581787 76 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 MIR5187-201ENST00000583479 76 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 DUXAP4-201ENST00000603046 613 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC008498.1-201ENST00000613012 531 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC005344.1-201ENST00000613391 459 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 PLCE1P1-201ENST00000622094 305 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AL354798.1-201ENST00000622505 329 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AL136313.1-201ENST00000624804 202 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC099654.13-201ENST00000639774 207 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 OR4G2P-202ENST00000641004 1759 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC091152.2-201ENST00000591628 2569 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AP004289.2-201ENST00000444413 1457 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 RNU4-24P-201ENST00000364565 139 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 RNU1-39P-201ENST00000383897 165 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 RNU6-1042P-201ENST00000384204 107 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 Y_RNA.559-201ENST00000384686 107 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC127391.1-201ENST00000411737 98 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC007899.1-201ENST00000412776 775 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 CDK8P2-201ENST00000415020 547 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC245054.1-201ENST00000420944 258 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AL589872.1-201ENST00000426602 288 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 ISCA1P6-201ENST00000427740 390 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 TAAR7P-201ENST00000436141 242 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC244505.5-201ENST00000443639 207 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC009237.8-201ENST00000445492 379 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 RNA5SP310-201ENST00000459084 116 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 RN7SL385P-201ENST00000468873 276 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 RPL7L1P8-201ENST00000469911 741 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 VN1R105P-201ENST00000486595 910 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC010587.1-201ENST00000505809 469 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 MTCO3P7-201ENST00000510008 774 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC079140.3-201ENST00000511111 550 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 RNU6-64P-201ENST00000517119 105 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 ATP5F1P5-201ENST00000526403 760 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC011979.2-201ENST00000527568 352 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC007224.1-201ENST00000564410 144 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC087499.8-201ENST00000578406 226 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AL161734.1-201ENST00000609720 557 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 HULC.1-201ENST00000612720 240 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AL133173.2-201ENST00000614270 90 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 MIR6875-201ENST00000617506 72 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 FRG1KP-201ENST00000623592 341 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AP000553.6-201ENST00000641242 118 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AL732372.2-225ENST00000642124 456 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 FAM35BP-202ENST00000497389 3337 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BRF2Q9HAW0 AC006504.1-201ENST00000562493 3666 ntBASIC3.55□□□□□ -1.84
BRF2Q9HAW0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BRF2Q9HAW0 FARSBP1-201ENST00000435808 1778 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms