Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC004067.1-201ENST00000608733 700 ntBASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 AL355472.4-201ENST00000610233 626 ntBASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 AC092140.2-201ENST00000618027 521 ntBASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 MIR3651-201ENST00000630427 90 ntBASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
POLR1BQ9H9Y6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.84
POLR1BQ9H9Y6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.59□□□□□ -1.84
POLR1BQ9H9Y6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.59□□□□□ -1.84
POLR1BQ9H9Y6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
POLR1BQ9H9Y6 AC002546.1-201ENST00000588041 2504 ntBASIC3.59□□□□□ -1.84
POLR1BQ9H9Y6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
POLR1BQ9H9Y6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 FGF7P2-201ENST00000332473 296 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 U3.4-201ENST00000363352 213 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 RNU5A-8P-201ENST00000364102 114 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL109755.1-201ENST00000401791 649 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL159169.1-201ENST00000421119 127 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 FTH1P1-201ENST00000437933 532 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL592447.1-201ENST00000447592 540 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 BX510359.1-201ENST00000456973 237 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 U3.44-201ENST00000458938 192 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC117522.2-201ENST00000510049 657 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL359273.1-201ENST00000510918 627 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 ARL2BPP6-201ENST00000512757 439 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 SNORA31.22-201ENST00000517204 135 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 ZNF519P3-201ENST00000557158 1032 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL133153.1-201ENST00000557756 303 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AL356432.3-201ENST00000568952 465 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC105224.1-201ENST00000587055 421 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC135507.1-201ENST00000607214 561 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC009090.3-201ENST00000616553 565 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 AC010149.2-201ENST00000637608 315 ntBASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
POLR1BQ9H9Y6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 RNU4-40P-201ENST00000364351 143 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC007390.1-201ENST00000415722 356 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AL356583.2-201ENST00000426536 280 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 BX890604.2-201ENST00000427883 474 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 CYCSP4-201ENST00000429682 331 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 TXNP1-201ENST00000441872 371 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AL162389.1-201ENST00000449233 177 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 RPS29P2-201ENST00000479278 136 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC080014.1-201ENST00000496877 1201 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 RN7SKP13-201ENST00000515933 244 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 Y_RNA.695-201ENST00000516715 107 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 RN7SKP209-201ENST00000516888 304 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 RN7SKP60-201ENST00000516985 239 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC060788.1-201ENST00000521318 469 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AP005205.1-201ENST00000563503 508 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC022146.1-201ENST00000595307 847 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC121334.2-201ENST00000605387 271 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 AC090970.3-201ENST00000612566 866 ntBASIC3.57□□□□□ -1.84
POLR1BQ9H9Y6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms