Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.79□□□□□ -1.8
CDT1Q9H211 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.79□□□□□ -1.8
CDT1Q9H211 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.79□□□□□ -1.8
CDT1Q9H211 AC025946.2-201ENST00000603398 234 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AC092954.2-201ENST00000609103 430 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AC007014.2-201ENST00000615581 479 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AL355365.1-201ENST00000616480 294 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.79□□□□□ -1.8
CDT1Q9H211 CR381572.1-201ENST00000625098 102 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.79□□□□□ -1.8
CDT1Q9H211 AL079305.1-201ENST00000623159 3008 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
CDT1Q9H211 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.79□□□□□ -1.8
CDT1Q9H211 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.79□□□□□ -1.8
CDT1Q9H211 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 AC004520.1-201ENST00000608362 1413 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 MFSD8-233ENST00000641482 4860 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDT1Q9H211 AL645937.1-201ENST00000641739 1652 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC092125.1-201ENST00000562568 1995 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDT1Q9H211 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
CDT1Q9H211 Y_RNA.46-201ENST00000362695 102 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 RNU6-97P-201ENST00000363387 104 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 RNU1-33P-201ENST00000364249 162 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 SNORD115-47-201ENST00000391226 86 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AL359704.1-201ENST00000411586 781 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC092447.6-201ENST00000414578 210 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AIMP1P1-201ENST00000418670 937 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 DPPA2P1-201ENST00000428060 556 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 MTND1P2-201ENST00000430604 821 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.78□□□□□ -1.8
CDT1Q9H211 RPL22P17-201ENST00000438729 315 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 PGBD4P3-201ENST00000440731 581 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDT1Q9H211 AL033528.1-201ENST00000453780 140 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC007967.1-201ENST00000455422 1159 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.78□□□□□ -1.8
CDT1Q9H211 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.78□□□□□ -1.8
CDT1Q9H211 RPS3AP50-201ENST00000487064 803 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC105252.1-201ENST00000503089 286 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.78□□□□□ -1.8
CDT1Q9H211 NDUFB4P2-201ENST00000509515 391 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 ARL2BPP6-201ENST00000512757 439 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.78□□□□□ -1.8
CDT1Q9H211 RNU2-27P-201ENST00000516185 142 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 SCARNA13-201ENST00000516672 275 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AC026333.2-201ENST00000542164 106 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.78□□□□□ -1.8
CDT1Q9H211 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.78□□□□□ -1.8
CDT1Q9H211 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.78□□□□□ -1.8
CDT1Q9H211 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AC009977.1-201ENST00000586015 570 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC067852.3-201ENST00000589177 561 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AL161729.4-201ENST00000604650 476 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC008250.2-201ENST00000615261 205 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AP001486.2-201ENST00000561652 5113 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDT1Q9H211 AC068647.1-201ENST00000489539 2265 ntBASIC3.78□□□□□ -1.8
CDT1Q9H211 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDT1Q9H211 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
CDT1Q9H211 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDT1Q9H211 RNA5SP235-201ENST00000365411 114 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDT1Q9H211 RPS3AP36-201ENST00000398190 775 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 RNU2-47P-201ENST00000410649 186 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDT1Q9H211 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 snoU109.4-201ENST00000458953 143 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 snoU13.3-201ENST00000459441 104 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms