Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC104057.1-201ENST00000515547 497 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AP006245.2-201ENST00000522004 300 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 VN1R91P-201ENST00000594377 169 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AL355816.1-201ENST00000607951 118 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AC073869.10-201ENST00000642016 354 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AL450345.1-202ENST00000605741 3881 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AC100778.3-201ENST00000580060 1750 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 Y_RNA.151-201ENST00000363566 112 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RNU6-946P-201ENST00000383878 107 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RNU6-378P-201ENST00000384324 107 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RNU6-729P-201ENST00000384399 107 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RNU6-121P-201ENST00000410525 99 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RNU2-25P-201ENST00000411041 191 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 UBE2FP1-201ENST00000416536 447 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 BX510359.3-201ENST00000422168 306 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AL360081.1-201ENST00000428299 555 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 DNAJC19P7-201ENST00000428811 344 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RPL7L1P9-201ENST00000431298 745 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RPL35AP21-201ENST00000437667 333 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RPL23AP31-201ENST00000456160 467 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 COPS8P2-201ENST00000473228 627 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RN7SL177P-201ENST00000476596 299 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 RNU4-71P-201ENST00000516258 113 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 HMGN1P28-201ENST00000521340 364 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AC126177.5-201ENST00000549599 178 ntBASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUCKS1Q9H1E3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 DDX18P3-201ENST00000404856 2007 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 Y_RNA.65-201ENST00000362846 100 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 SNORD50B-201ENST00000364995 70 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 RNU6-48P-201ENST00000384161 107 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 RNU6-171P-201ENST00000384354 107 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 MIR105-1-201ENST00000385222 81 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 HMGB3P7-201ENST00000400214 611 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 RNU6-1203P-201ENST00000410703 110 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 AC069218.2-201ENST00000411665 344 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 AL451074.5-201ENST00000415894 435 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 SYF2P2-201ENST00000417620 583 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 AC234779.1-201ENST00000425910 285 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 COX6CP13-201ENST00000428703 226 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 EZH2P1-201ENST00000431167 291 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 RPS3AP46-201ENST00000448352 682 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 RN7SL629P-201ENST00000489622 285 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 AC073073.1-201ENST00000493920 463 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 RNU7-4P-201ENST00000516961 62 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 AC093227.2-201ENST00000589357 285 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 AL390123.1-201ENST00000603216 237 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 RNF138P2-201ENST00000603490 592 ntBASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.62□□□□□ -1.51
NUCKS1Q9H1E3 AL122126.1-201ENST00000546905 1318 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms