Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC073343.1-201ENST00000328239 651 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-641P-201ENST00000384006 107 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 RN7SKP159-201ENST00000410657 292 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AL451062.2-201ENST00000427515 271 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 MRPS18BP2-201ENST00000434310 759 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC005094.1-201ENST00000440420 368 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 PPIAP3-201ENST00000450588 505 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AL121877.1-201ENST00000453704 622 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC007967.1-201ENST00000455422 1159 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 RPL7P23-201ENST00000493874 747 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC006064.5-201ENST00000541782 248 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC107016.1-201ENST00000550463 337 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 RPS3AP23-202ENST00000574601 686 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC006254.3-201ENST00000603353 884 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AL354984.3-201ENST00000604803 325 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 HMGB1P50-201ENST00000605814 607 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AL021997.2-201ENST00000615674 271 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 FRG1KP-201ENST00000623592 341 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC011944.2-201ENST00000624440 683 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
AMBRA1Q9C0C7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
AMBRA1Q9C0C7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 OR4G1P-203ENST00000641984 1631 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 RNU4-76P-201ENST00000364509 141 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 RNU5E-6P-201ENST00000365574 115 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 SNORA37-201ENST00000384504 129 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 U3.22-201ENST00000391120 215 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AL109755.1-201ENST00000401791 649 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 SNORA3C-201ENST00000408792 125 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 RNU2-36P-201ENST00000410361 191 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 SRIP2-201ENST00000428470 166 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 CKS1BP5-201ENST00000434172 273 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AL162388.1-201ENST00000450912 352 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 SNORD97-201ENST00000459187 142 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 snoU13.3-201ENST00000459441 104 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 RPL7L1P8-201ENST00000469911 741 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC093278.1-201ENST00000494700 600 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 VWA8P1-201ENST00000510889 176 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 PSMA2P1-201ENST00000526365 646 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC103843.2-201ENST00000530523 682 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC243972.3-201ENST00000539655 198 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC023050.3-201ENST00000541142 333 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 MIR4458-201ENST00000578872 75 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 MIR4293-201ENST00000584305 78 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 VN1R80P-201ENST00000597126 338 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC010680.3-201ENST00000604215 520 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 AC007390.2-201ENST00000606229 3803 ntBASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
AMBRA1Q9C0C7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms