Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 AL672167.1-204ENST00000641875 3017 ntBASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 AC130650.2-201ENST00000618736 2403 ntBASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CNTNAP4Q9C0A0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 MIR548K-201ENST00000408406 116 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 AC092832.1-201ENST00000422934 400 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 AC005517.2-201ENST00000424673 553 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 AL162395.1-201ENST00000457882 422 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 RNU6-1208P-201ENST00000459588 107 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 RPS4XP10-201ENST00000465034 731 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 AL139099.1-201ENST00000497398 403 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 RPL39P5-202ENST00000512505 151 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 RNU2-10P-201ENST00000516375 211 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 COX6CP5-201ENST00000527162 228 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 AC063950.1-201ENST00000552036 308 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 MIR4775-201ENST00000581168 75 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 MIR5690-201ENST00000583739 73 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 uc_338.22-201ENST00000622722 187 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 MTND5P28-201ENST00000438005 1594 ntBASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.24□□□□□ -1.57
CNTNAP4Q9C0A0 SNORA60-201ENST00000362396 134 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 Y_RNA.112-201ENST00000363250 102 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 RNU5A-8P-201ENST00000364102 114 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 Y_RNA.212-201ENST00000364177 102 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 Y_RNA.234-201ENST00000364409 97 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 RNY3P13-201ENST00000365542 102 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 MIR7-3-201ENST00000384898 110 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 RN7SKP167-201ENST00000411047 285 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 CYCSP10-201ENST00000417973 294 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AF228730.2-201ENST00000438784 848 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 RPL7P52-201ENST00000449200 742 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AC087879.1-201ENST00000474343 374 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AC012123.2-201ENST00000485809 248 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AP005435.4-201ENST00000529514 284 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AL159972.1-201ENST00000625150 448 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AL022311.1-201ENST00000623726 19416 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 AC121333.1-201ENST00000567488 2709 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 MTND5P10-201ENST00000603719 1809 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 Y_RNA.22-201ENST00000362492 102 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 RNU6-552P-201ENST00000362869 119 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 RNU6-1309P-201ENST00000363305 108 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 RN7SKP158-201ENST00000410453 326 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 HMGN1P24-201ENST00000412282 298 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 PMCHL1-202ENST00000423102 261 ntBASIC5.23□□□□□ -1.57
CNTNAP4Q9C0A0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms