Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNA5SP27-201ENST00000363839 119 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 RNU6-173P-201ENST00000364215 104 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AL121882.1-201ENST00000422893 417 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 PTP4A1P7-201ENST00000423476 514 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 IGLV3-17-201ENST00000519099 244 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 EEF1B2P4-201ENST00000551398 348 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 LSM6P2-201ENST00000552208 177 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 HMGB1P14-201ENST00000557424 591 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AC008739.2-201ENST00000597006 317 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AC009831.4-201ENST00000620744 325 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AC110079.1-202ENST00000635213 138 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AL512643.1-201ENST00000635735 524 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 AC135776.4-201ENST00000624300 1904 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 SNORD51.1-201ENST00000365405 77 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 MIR493-201ENST00000385254 89 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AL356320.2-201ENST00000417263 507 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 PNRC2P1-201ENST00000423940 420 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC079780.1-201ENST00000428259 207 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC092427.1-202ENST00000430569 476 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 EZH2P1-201ENST00000431167 291 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 HMGN2P23-201ENST00000456759 269 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC004263.1-201ENST00000479327 332 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC135721.1-201ENST00000497954 479 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 GTF2IP9-201ENST00000502460 301 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC091917.2-201ENST00000505002 744 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 RAC1P5-201ENST00000512182 576 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AP001317.1-201ENST00000531194 960 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AP000867.2-201ENST00000532468 320 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC010738.1-201ENST00000604970 987 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 MIR6873-201ENST00000622788 63 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AC012321.1-201ENST00000561622 1588 ntBASIC2.61□□□□□ -1.99
UPF3BQ9BZI7 AL161781.1-201ENST00000354277 403 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 RNU6-76P-201ENST00000384060 104 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 U3.29-201ENST00000391296 212 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 RPL23AP36-201ENST00000413895 458 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AC009237.2-201ENST00000421358 284 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 OR51B8P-201ENST00000449892 769 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AC010099.1-201ENST00000455434 375 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 RPL23AP49-201ENST00000492925 468 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AC116337.1-201ENST00000509680 687 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AC108729.3-201ENST00000513484 108 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 RNU6-1095P-201ENST00000516148 108 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 SUB1P1-201ENST00000524415 382 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 OR4R1P-201ENST00000529879 463 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 AC121758.2-201ENST00000553271 193 ntBASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.6□□□□□ -1.99
UPF3BQ9BZI7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 Z82209.1-201ENST00000422141 2135 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 MTND5P11-201ENST00000511037 1812 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 RNU6-14P-201ENST00000384630 106 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 MIR1287-201ENST00000408492 90 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 UBE2V2P3-201ENST00000433562 437 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 NDUFB4P6-201ENST00000436819 366 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 RNF2P1-201ENST00000442955 1010 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AL591719.1-201ENST00000444669 744 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC025181.1-201ENST00000477507 416 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC023424.2-201ENST00000493479 777 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 OR52A4P-203ENST00000498233 1014 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms