Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC084851.1-201ENST00000529105 249 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.35□□□□□ -2.03
SCAPERQ9BY12 OR10AB1P-201ENST00000609613 938 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 AL157834.3-201ENST00000615543 103 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 AC110792.3-201ENST00000595906 1614 ntBASIC2.34□□□□□ -2.03
SCAPERQ9BY12 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 MIR517C-201ENST00000385103 95 ntBASIC2.34□□□□□ -2.03
SCAPERQ9BY12 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 RPL21P104-201ENST00000464143 478 ntBASIC2.34□□□□□ -2.03
SCAPERQ9BY12 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 ATP5EP1-201ENST00000510257 156 ntBASIC2.34□□□□□ -2.03
SCAPERQ9BY12 MTCO1P47-201ENST00000523889 1271 ntBASIC2.34□□□□□ -2.03
SCAPERQ9BY12 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
SCAPERQ9BY12 AC010733.2-201ENST00000589496 5702 ntBASIC2.34□□□□□ -2.04
SCAPERQ9BY12 Y_RNA.112-201ENST00000363250 102 ntBASIC2.34□□□□□ -2.04
SCAPERQ9BY12 SNORD114-22-201ENST00000365423 72 ntBASIC2.34□□□□□ -2.04
SCAPERQ9BY12 AC092447.6-201ENST00000414578 210 ntBASIC2.34□□□□□ -2.04
SCAPERQ9BY12 TRGV6-201ENST00000417928 299 ntBASIC2.34□□□□□ -2.04
SCAPERQ9BY12 AL513185.2-201ENST00000425543 193 ntBASIC2.34□□□□□ -2.04
SCAPERQ9BY12 RPL23AP16-201ENST00000441715 421 ntBASIC2.34□□□□□ -2.04
SCAPERQ9BY12 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.34□□□□□ -2.04
SCAPERQ9BY12 SNORA31.24-201ENST00000517232 57 ntBASIC2.34□□□□□ -2.04
SCAPERQ9BY12 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.34□□□□□ -2.04
SCAPERQ9BY12 AC024614.2-201ENST00000577584 372 ntBASIC2.34□□□□□ -2.04
SCAPERQ9BY12 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.34□□□□□ -2.04
SCAPERQ9BY12 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.34□□□□□ -2.04
SCAPERQ9BY12 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.34□□□□□ -2.04
SCAPERQ9BY12 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.33□□□□□ -2.04
SCAPERQ9BY12 AL359851.1-201ENST00000569460 4997 ntBASIC2.33□□□□□ -2.04
SCAPERQ9BY12 CCNB2P1-201ENST00000399411 1150 ntBASIC2.33□□□□□ -2.04
SCAPERQ9BY12 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SCAPERQ9BY12 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SCAPERQ9BY12 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.33□□□□□ -2.04
SCAPERQ9BY12 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.33□□□□□ -2.04
SCAPERQ9BY12 OR5H4P-201ENST00000510851 923 ntBASIC2.33□□□□□ -2.04
SCAPERQ9BY12 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.33□□□□□ -2.04
SCAPERQ9BY12 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.33□□□□□ -2.04
SCAPERQ9BY12 RNA5SP480-201ENST00000516840 109 ntBASIC2.33□□□□□ -2.04
SCAPERQ9BY12 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.33□□□□□ -2.04
SCAPERQ9BY12 AL161734.1-201ENST00000609720 557 ntBASIC2.33□□□□□ -2.04
SCAPERQ9BY12 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SCAPERQ9BY12 MAPK10-266ENST00000641066 6555 ntBASIC2.32□□□□□ -2.04
SCAPERQ9BY12 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SCAPERQ9BY12 RNU4-51P-201ENST00000364206 140 ntBASIC2.32□□□□□ -2.04
SCAPERQ9BY12 HMGN2P19-201ENST00000425149 265 ntBASIC2.32□□□□□ -2.04
SCAPERQ9BY12 RPL17P49-201ENST00000443728 411 ntBASIC2.32□□□□□ -2.04
SCAPERQ9BY12 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.32□□□□□ -2.04
SCAPERQ9BY12 RBM43P1-201ENST00000476891 1081 ntBASIC2.32□□□□□ -2.04
SCAPERQ9BY12 AC096571.1-202ENST00000506634 735 ntBASIC2.32□□□□□ -2.04
SCAPERQ9BY12 RNU1-92P-201ENST00000517017 135 ntBASIC2.32□□□□□ -2.04
SCAPERQ9BY12 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.32□□□□□ -2.04
SCAPERQ9BY12 LLPHP1-201ENST00000603571 367 ntBASIC2.32□□□□□ -2.04
SCAPERQ9BY12 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SCAPERQ9BY12 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SCAPERQ9BY12 AC098592.2-201ENST00000413158 265 ntBASIC2.31□□□□□ -2.04
SCAPERQ9BY12 MRPL42P6-201ENST00000486397 371 ntBASIC2.31□□□□□ -2.04
SCAPERQ9BY12 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.31□□□□□ -2.04
SCAPERQ9BY12 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.31□□□□□ -2.04
SCAPERQ9BY12 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.31□□□□□ -2.04
SCAPERQ9BY12 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.31□□□□□ -2.04
SCAPERQ9BY12 AC139103.1-201ENST00000534696 1030 ntBASIC2.31□□□□□ -2.04
SCAPERQ9BY12 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.31□□□□□ -2.04
SCAPERQ9BY12 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCAPERQ9BY12 U73479.1-201ENST00000618062 168 ntBASIC2.31□□□□□ -2.04
SCAPERQ9BY12 AL353770.2-201ENST00000620024 78 ntBASIC2.31□□□□□ -2.04
SCAPERQ9BY12 HMGB1P5-201ENST00000255320 642 ntBASIC2.3□□□□□ -2.04
SCAPERQ9BY12 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 MIR96-201ENST00000362288 78 ntBASIC2.3□□□□□ -2.04
SCAPERQ9BY12 RNU6-582P-201ENST00000362989 107 ntBASIC2.3□□□□□ -2.04
SCAPERQ9BY12 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 AL451074.3-201ENST00000437709 472 ntBASIC2.3□□□□□ -2.04
SCAPERQ9BY12 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 AC092436.3-201ENST00000511788 257 ntBASIC2.3□□□□□ -2.04
SCAPERQ9BY12 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 AC007620.3-201ENST00000608131 497 ntBASIC2.3□□□□□ -2.04
SCAPERQ9BY12 AL031601.2-202ENST00000622650 282 ntBASIC2.3□□□□□ -2.04
SCAPERQ9BY12 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.3□□□□□ -2.04
SCAPERQ9BY12 CENPCP1-201ENST00000533085 2578 ntBASIC2.29□□□□□ -2.04
SCAPERQ9BY12 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.29□□□□□ -2.04
SCAPERQ9BY12 AC093084.1-201ENST00000424233 687 ntBASIC2.29□□□□□ -2.04
SCAPERQ9BY12 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.29□□□□□ -2.04
SCAPERQ9BY12 TRBV8-1-201ENST00000481590 279 ntBASIC2.29□□□□□ -2.04
SCAPERQ9BY12 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.29□□□□□ -2.04
SCAPERQ9BY12 MIR3199-1-201ENST00000582434 88 ntBASIC2.29□□□□□ -2.04
SCAPERQ9BY12 AL592494.3-201ENST00000609485 464 ntBASIC2.29□□□□□ -2.04
SCAPERQ9BY12 LINC00216-201ENST00000623548 1126 ntBASIC2.29□□□□□ -2.04
SCAPERQ9BY12 AC098679.5-201ENST00000624394 571 ntBASIC2.29□□□□□ -2.04
SCAPERQ9BY12 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SCAPERQ9BY12 MIR153-1-201ENST00000384914 90 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms