Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AC128687.2-201ENST00000609657 566 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 AL121757.2-201ENST00000611223 313 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 MIR6780A-201ENST00000615089 68 ntBASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TRAIPQ9BWF2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 MIR192-201ENST00000384915 110 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 MIR325-201ENST00000385260 98 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AC007738.1-201ENST00000413892 348 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AC104333.2-201ENST00000422630 192 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AL356535.1-201ENST00000440335 398 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 RPL7AP61-201ENST00000443410 636 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 CECR9-201ENST00000453421 199 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 SUMO2P6-201ENST00000505273 288 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 RNU6-256P-201ENST00000516747 97 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AC087477.6-201ENST00000559595 843 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 TVP23CP2-201ENST00000571473 623 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AC104662.1-201ENST00000604448 511 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AL132765.2-201ENST00000610812 351 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 MIR6798-201ENST00000612887 67 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 MIR1302-1-201ENST00000637932 143 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AL359693.1-201ENST00000614959 2407 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 NEAT1-202ENST00000501122 22743 ntBASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRAIPQ9BWF2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 FAT1P1-201ENST00000406588 507 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 CTSL3P-202ENST00000412179 788 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 RPL26P29-201ENST00000415623 438 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AF186996.5-201ENST00000418098 904 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 RPS24P13-201ENST00000442520 397 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 RN7SKP13-201ENST00000515933 244 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 RNA5SP360-201ENST00000516555 118 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 RNA5SP309-201ENST00000516670 106 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 RNU6-323P-201ENST00000521915 107 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AL110118.1-201ENST00000553543 400 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 MIR4330-201ENST00000579077 105 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AC091042.1-201ENST00000579213 173 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 MIR3667-201ENST00000581025 74 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AC234771.5-201ENST00000600161 514 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AL022322.2-201ENST00000624072 20397 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AL049641.1-201ENST00000441055 1948 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 AC100778.3-201ENST00000580060 1750 ntBASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
TRAIPQ9BWF2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AC079741.1-201ENST00000321498 212 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 RNU6-254P-201ENST00000363377 107 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 MIR578-201ENST00000384828 96 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 YPEL5P1-201ENST00000419731 367 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AC073063.1-201ENST00000434352 607 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AC011753.3-201ENST00000443436 406 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 RPS29P33-201ENST00000456717 146 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms