Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL356266.1-201ENST00000623311 483 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC040168.1-201ENST00000623594 991 ntBASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC28BQ9BUN5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RNY4P24-201ENST00000362735 96 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RNA5SP258-201ENST00000362750 119 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RNU6-359P-201ENST00000365466 108 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 SNORA26.8-201ENST00000391306 124 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RPS3AP26-201ENST00000398259 784 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 MTCO1P17-201ENST00000411522 491 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RAD23BP2-201ENST00000416003 1207 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 NPM1P11-201ENST00000417106 855 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RPL21P66-201ENST00000426566 466 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AL365184.2-201ENST00000431139 435 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RSU1P2-202ENST00000437884 485 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 LSM1P1-201ENST00000438629 273 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 BMI1P1-201ENST00000445879 941 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AC009220.1-201ENST00000451614 275 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 HMGB1P25-201ENST00000468402 607 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AC116337.2-201ENST00000477662 156 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RN7SL20P-201ENST00000488827 297 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AL024509.2-201ENST00000493462 493 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AC034159.1-201ENST00000513885 583 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 SETP2-201ENST00000553886 926 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RPL21P12-201ENST00000559810 515 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 MIR544B-201ENST00000582372 78 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 BNIP3P23-201ENST00000599655 511 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AC135507.1-201ENST00000607214 561 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AP001350.1-201ENST00000601906 1524 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 AC006378.2-201ENST00000623178 2476 ntBASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
CCDC28BQ9BUN5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 MTND4P16-201ENST00000466108 1367 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RNU4-21P-201ENST00000362802 126 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RNU4-91P-201ENST00000364778 135 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RNU6-744P-201ENST00000365557 107 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RNU6-1316P-201ENST00000384242 108 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 MIR141-201ENST00000384975 95 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AC025750.1-201ENST00000399891 379 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AL451074.5-201ENST00000415894 435 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 TOMM22P1-201ENST00000418578 312 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AC004975.1-201ENST00000428733 208 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RPL37P21-201ENST00000435890 276 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 HSPD1P21-201ENST00000436541 245 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 MTND4P32-201ENST00000437189 1237 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 LARP1BP3-201ENST00000437229 869 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RPL17P49-201ENST00000443728 411 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 CDC27P1-201ENST00000445384 715 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 MTND1P29-201ENST00000448112 647 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AL353691.1-201ENST00000451332 387 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 snoU13.8-201ENST00000458890 104 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RPL21P10-201ENST00000463521 490 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RPS4XP10-201ENST00000465034 731 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RPL9P33-201ENST00000484311 566 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AC023424.2-201ENST00000493479 777 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AC034222.1-201ENST00000494052 532 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AC117532.1-201ENST00000514638 323 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RNU1-61P-201ENST00000516107 151 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 OR5B10P-201ENST00000532869 642 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 SETP7-201ENST00000552169 453 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AC091489.2-201ENST00000566263 604 ntBASIC3□□□□□ -1.93
CCDC28BQ9BUN5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3□□□□□ -1.93
CCDC28BQ9BUN5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms