Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNU6-173P-201ENST00000364215 104 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AC005534.2-201ENST00000431047 433 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 RPL21P112-201ENST00000434403 463 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 HSPD1P21-201ENST00000436541 245 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 NDUFA5P4-201ENST00000436704 385 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AC104651.2-201ENST00000447549 528 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 HMGN2P21-201ENST00000447764 270 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 SNRPGP6-201ENST00000451124 220 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 CYCSP35-201ENST00000451978 304 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AL049714.1-201ENST00000466686 347 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 RN7SL812P-201ENST00000493791 279 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 FGF7P4-201ENST00000509595 295 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AC023141.12-201ENST00000512399 199 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 RNA5SP337-201ENST00000517007 109 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AP003072.2-201ENST00000527756 676 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AC010928.3-201ENST00000587712 541 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AL391646.1-201ENST00000603860 190 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AL354984.3-201ENST00000604803 325 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AL592436.1-201ENST00000605135 558 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AL162730.1-201ENST00000605734 292 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AL391813.2-201ENST00000609113 322 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 AC139792.3-201ENST00000623525 224 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 PRO1804-201ENST00000623780 2050 ntBASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LRFN3Q9BTN0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 RNU4-79P-201ENST00000362764 141 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 RNU6-1097P-201ENST00000363586 107 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 RNU4-1-201ENST00000363925 141 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 SNORA7.2-201ENST00000364446 145 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 U3.11-201ENST00000364476 212 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 RNA5SP267-201ENST00000364893 126 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 Y_RNA.326-201ENST00000365176 113 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 RNU6-882P-201ENST00000391025 103 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AL158156.1-201ENST00000422509 473 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 CALM1P1-201ENST00000442082 433 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC079781.2-201ENST00000446424 169 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC132479.1-201ENST00000449160 144 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC140076.1-201ENST00000449897 361 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 RPL39P36-201ENST00000490784 156 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 VN1R104P-201ENST00000505115 1009 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 RNA5SP497-201ENST00000516081 97 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AP003034.1-201ENST00000534621 422 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 HIF1AP1-201ENST00000553642 175 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 MIR3922-201ENST00000585192 84 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC012507.3-201ENST00000603556 477 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AC243312.2-201ENST00000623340 601 ntBASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LRFN3Q9BTN0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 OR52B1P-201ENST00000316506 909 ntBASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 FRG1CP-201ENST00000358464 769 ntBASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 Y_RNA.72-201ENST00000362894 103 ntBASIC4.29□□□□□ -1.72
LRFN3Q9BTN0 AL691449.1-201ENST00000426570 421 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms