Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RNU6-920P-201ENST00000410926 92 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 RN7SKP140-201ENST00000411196 284 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC107081.1-201ENST00000414975 361 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC007560.1-201ENST00000426912 237 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AL121578.1-201ENST00000428051 892 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC012497.1-201ENST00000429392 575 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC092573.2-201ENST00000434546 243 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 ARF4P4-201ENST00000439608 520 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 SDCBPP1-201ENST00000440192 890 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AL109933.2-201ENST00000452651 260 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 DNAJC19P8-201ENST00000452887 259 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 ANKRD26P4-201ENST00000455755 950 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC069306.1-201ENST00000507006 843 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC026436.1-201ENST00000510537 270 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AL359273.1-201ENST00000510918 627 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 RNU6-1282P-201ENST00000516735 96 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 BTF3P12-201ENST00000519620 469 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 RPL7P20-201ENST00000520308 745 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 MTCYBP20-201ENST00000524239 1129 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 OR4P1P-201ENST00000530808 1136 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 CYCSP26-201ENST00000534107 320 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 MIR3200-201ENST00000580767 85 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 CR589904.2-201ENST00000612533 440 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC007998.5-201ENST00000622938 237 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC091925.2-201ENST00000625059 256 ntBASIC1.35□□□□□ -2.19
LIMD2Q9BT23 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
LIMD2Q9BT23 FTLP6-201ENST00000355274 422 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 SNORA80A-201ENST00000363922 136 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 RNU6-882P-201ENST00000391025 103 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AL122016.1-201ENST00000403365 367 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 NANOGP5-201ENST00000424456 877 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 RPL31P60-201ENST00000478450 367 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 HMGB3P17-201ENST00000504195 649 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 RN7SKP132-201ENST00000516001 208 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 RNA5SP148-201ENST00000516527 94 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 RNU2-44P-201ENST00000516795 194 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 RNU6-798P-201ENST00000516912 103 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 SCARNA11.3-201ENST00000517276 130 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 MIR5007-201ENST00000583098 95 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 MIR3935-201ENST00000583472 104 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AC061975.8-201ENST00000587058 721 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AC012493.3-201ENST00000604494 112 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AC007938.3-201ENST00000604965 623 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AL137246.1-201ENST00000607072 977 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AC107214.2-201ENST00000608204 634 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AC009318.4-201ENST00000620496 486 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 MIR6766-201ENST00000622641 72 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AC010872.1-201ENST00000624225 675 ntBASIC1.34□□□□□ -2.19
LIMD2Q9BT23 AL136360.1-201ENST00000503377 1900 ntBASIC1.34□□□□□ -2.2
LIMD2Q9BT23 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
LIMD2Q9BT23 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
LIMD2Q9BT23 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LIMD2Q9BT23 AC010329.5-201ENST00000623497 2174 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 RNU6-252P-201ENST00000363232 107 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 SNORA67.4-201ENST00000384688 142 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 MIR518C-201ENST00000384822 101 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 MIR767-201ENST00000390228 109 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 SNORA48.3-201ENST00000391081 134 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 NPM1P10-201ENST00000398310 865 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 AL030996.1-201ENST00000411430 235 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 AL133384.1-201ENST00000412744 351 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 AL135786.1-201ENST00000415892 214 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 OR4K6P-201ENST00000416478 897 ntBASIC1.33□□□□□ -2.2
LIMD2Q9BT23 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.33□□□□□ -2.2
LIMD2Q9BT23 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms