Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC38A3Q99624 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC38A3Q99624 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 PABPC1P7-201ENST00000413177 1513 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC079741.1-201ENST00000321498 212 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 Y_RNA.39-201ENST00000362620 98 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 RNU6-82P-201ENST00000363970 107 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 RNU6-1078P-201ENST00000364522 103 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC38A3Q99624 RNU6-641P-201ENST00000384006 107 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 Y_RNA.478-201ENST00000384358 107 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 U3.30-201ENST00000391308 210 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AL356421.1-201ENST00000403255 413 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 RNU6-121P-201ENST00000410525 99 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 RNU6-55P-201ENST00000411092 107 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 COX5BP7-201ENST00000414780 274 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 MED13P1-201ENST00000428342 171 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 MYL8P-204ENST00000431574 518 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC011753.3-201ENST00000443436 406 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 CYCSP24-201ENST00000445119 316 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AL035551.1-201ENST00000446931 348 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 HMGB3P21-201ENST00000452483 547 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC133473.1-201ENST00000455173 299 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC104563.1-201ENST00000476147 376 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC098869.1-201ENST00000481627 292 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC074198.2-201ENST00000508153 258 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 RNA5SP392-201ENST00000516905 112 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC040958.1-201ENST00000561102 201 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 AL353997.4-201ENST00000586196 166 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AL121932.1-201ENST00000605542 214 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 ATP5A1P2-202ENST00000616464 443 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 AP000346.3-201ENST00000622821 210 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC38A3Q99624 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC38A3Q99624 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC38A3Q99624 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC38A3Q99624 MAPK10-349ENST00000641767 3661 ntBASIC4.69□□□□□ -1.66
SLC38A3Q99624 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC38A3Q99624 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
SLC38A3Q99624 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC38A3Q99624 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC38A3Q99624 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC38A3Q99624 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC38A3Q99624 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 RNU6-1290P-201ENST00000362957 109 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 Y_RNA.276-201ENST00000364732 109 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 RNA5SP505-201ENST00000364748 108 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 RNU4-7P-201ENST00000364758 141 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 SNORD115-7-201ENST00000365306 82 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 OR52E6-202ENST00000379946 954 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 RNU6-842P-201ENST00000384269 107 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 RNA5SP219-201ENST00000390940 113 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 AL078604.1-201ENST00000404609 466 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 MIR1271-201ENST00000408537 86 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 FAR2P2-201ENST00000413041 594 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 FAR2P4-202ENST00000425399 584 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 USMG5P1-201ENST00000425964 177 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 SNAP23P1-201ENST00000433229 246 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC38A3Q99624 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 AC016831.4-201ENST00000438302 307 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 AC010326.1-201ENST00000462726 602 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 AP000942.1-201ENST00000463969 747 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 RN7SL354P-201ENST00000469282 294 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 RPL23AP71-201ENST00000470966 469 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 RNU6-189P-201ENST00000516120 101 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 MIR5692C1-201ENST00000585309 91 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 AC073657.2-201ENST00000605661 303 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 AP001282.2-201ENST00000616149 309 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 AL022401.1-201ENST00000619498 108 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 AC021753.1-201ENST00000635724 168 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 RBPJP2-201ENST00000618187 1444 ntBASIC4.68□□□□□ -1.66
SLC38A3Q99624 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC38A3Q99624 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SLC38A3Q99624 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms