Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RPRD1AQ96P16 NACA3P-201ENST00000359690 648 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 HMGB1P17-201ENST00000403495 628 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 RNA5SP21-201ENST00000410917 96 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 AL139421.1-201ENST00000423010 169 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.82□□□□□ -1.96
RPRD1AQ96P16 RPS29P6-201ENST00000438196 145 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 LSM1P1-201ENST00000438629 273 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 SDCBPP1-201ENST00000440192 890 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 RPL18AP17-201ENST00000455326 198 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 SEM1P1-201ENST00000506694 209 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 RNA5SP356-201ENST00000515972 94 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 RNU6-583P-201ENST00000516012 92 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 SNORA9.3-201ENST00000516383 129 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 AC128657.1-201ENST00000549459 145 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.82□□□□□ -1.96
RPRD1AQ96P16 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.82□□□□□ -1.96
RPRD1AQ96P16 MIR3609-201ENST00000582661 80 ntBASIC2.82□□□□□ -1.96
RPRD1AQ96P16 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.82□□□□□ -1.96
RPRD1AQ96P16 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.82□□□□□ -1.96
RPRD1AQ96P16 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 RNU6-343P-201ENST00000364709 104 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 RNU6-1122P-201ENST00000384449 107 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AL031679.1-201ENST00000400616 525 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC006499.2-201ENST00000513470 337 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 RNY4P37-201ENST00000516225 96 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 SNORA31.21-201ENST00000517180 77 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 SNORA31.22-201ENST00000517204 135 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC118942.1-201ENST00000529674 1035 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC007954.1-201ENST00000554198 494 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC005046.1-201ENST00000608515 625 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC090132.2-201ENST00000615881 347 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 OR1S1-201ENST00000624470 978 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 SCARNA15.3-201ENST00000626315 122 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 SCARNA4.1-201ENST00000628597 123 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AL356473.1-201ENST00000406203 1408 ntBASIC2.81□□□□□ -1.96
RPRD1AQ96P16 AC010680.1-201ENST00000590024 3590 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC008669.1-201ENST00000565823 2178 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC026241.1-201ENST00000517873 2142 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC005539.1-201ENST00000443768 1479 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 SNORD21-201ENST00000383953 95 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 RNU6-1000P-201ENST00000391066 106 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AL360182.1-201ENST00000397433 468 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AL512633.1-201ENST00000399931 655 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 RNU2-25P-201ENST00000411041 191 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 TPMTP2-201ENST00000414372 726 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 MTCO2P5-201ENST00000422621 426 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC234781.2-201ENST00000426370 994 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC090774.1-201ENST00000435925 246 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC004924.1-201ENST00000480160 781 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC113347.3-201ENST00000509113 148 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC034159.1-201ENST00000513885 583 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 RNU6-276P-201ENST00000516114 96 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 RNU6-528P-201ENST00000516926 100 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AL132657.2-201ENST00000564417 358 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 MIR4319-201ENST00000577285 85 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AP001429.1-201ENST00000602568 530 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 BNIP3P31-201ENST00000604515 566 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AL035413.2-201ENST00000604801 525 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AL590099.1-201ENST00000615276 138 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC079228.1-201ENST00000624774 1049 ntBASIC2.8□□□□□ -1.96
RPRD1AQ96P16 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RPRD1AQ96P16 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 RNU6-28P-201ENST00000362378 107 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 RNU6-76P-201ENST00000384060 104 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms