Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.97□□□□□ -1.93
USP47Q96K76 UBE2D3P2-201ENST00000424409 445 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 AC012497.1-201ENST00000429392 575 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 SETP8-201ENST00000435341 628 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.97□□□□□ -1.93
USP47Q96K76 RPS26P21-201ENST00000475397 348 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.97□□□□□ -1.93
USP47Q96K76 AC106872.3-201ENST00000495104 446 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
USP47Q96K76 AC091860.1-201ENST00000505723 432 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.97□□□□□ -1.93
USP47Q96K76 MTND4P2-201ENST00000507767 1203 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 SNORA31.8-201ENST00000516327 108 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 RN7SKP219-201ENST00000516825 296 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 AC104986.1-201ENST00000517978 436 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 ARL2BPP5-201ENST00000523141 481 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.97□□□□□ -1.93
USP47Q96K76 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.97□□□□□ -1.93
USP47Q96K76 AC093510.2-201ENST00000562820 896 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.97□□□□□ -1.93
USP47Q96K76 RPAP2P1-201ENST00000603626 1168 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 AP001330.4-201ENST00000604350 154 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 AL356266.1-201ENST00000623311 483 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 AL356094.1-201ENST00000624663 1212 ntBASIC2.97□□□□□ -1.93
USP47Q96K76 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.97□□□□□ -1.93
USP47Q96K76 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP47Q96K76 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP47Q96K76 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP47Q96K76 RNU6-1074P-201ENST00000383995 104 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 SNORA51.6-201ENST00000384151 125 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 RNU2-2P-201ENST00000410396 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AL136133.1-201ENST00000413694 376 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AC092447.6-201ENST00000414578 210 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.96□□□□□ -1.94
USP47Q96K76 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.96□□□□□ -1.94
USP47Q96K76 AC129850.1-201ENST00000436203 508 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 HMGN2P20-201ENST00000437531 273 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.96□□□□□ -1.94
USP47Q96K76 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.96□□□□□ -1.94
USP47Q96K76 AL591719.1-201ENST00000444669 744 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AC104435.1-201ENST00000483483 166 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.96□□□□□ -1.94
USP47Q96K76 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.96□□□□□ -1.94
USP47Q96K76 Y_RNA.673-201ENST00000516306 88 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AC025881.1-201ENST00000518851 512 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.96□□□□□ -1.94
USP47Q96K76 SNRPGP16-201ENST00000533275 226 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.96□□□□□ -1.94
USP47Q96K76 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USP47Q96K76 AC016877.3-201ENST00000606778 504 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AC103710.1-201ENST00000610003 901 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.15-201ENST00000611544 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.16-201ENST00000613119 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.12-201ENST00000613778 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.20-201ENST00000613956 192 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.9-201ENST00000615427 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.11-201ENST00000616345 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.2-201ENST00000616535 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AC068831.7-201ENST00000616954 363 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.3-201ENST00000617785 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AC078880.5-201ENST00000617845 421 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.19-201ENST00000618602 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 RNU2-1-201ENST00000618664 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.6-201ENST00000619225 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.5-201ENST00000619465 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 U2.10-201ENST00000620268 191 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 AC073592.7-201ENST00000623659 507 ntBASIC2.96□□□□□ -1.94
USP47Q96K76 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.96□□□□□ -1.94
USP47Q96K76 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.96□□□□□ -1.94
USP47Q96K76 AC002546.1-201ENST00000588041 2504 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USP47Q96K76 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP47Q96K76 AC009487.4-201ENST00000624969 3585 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
USP47Q96K76 AL356292.1-201ENST00000283110 373 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 RNU6-1159P-201ENST00000362933 107 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 Y_RNA.238-201ENST00000364441 102 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 SNORA67.3-201ENST00000384366 140 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.95□□□□□ -1.94
USP47Q96K76 RPL22P22-201ENST00000395439 379 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 AL133264.1-201ENST00000407157 562 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.95□□□□□ -1.94
USP47Q96K76 AC241584.1-201ENST00000438469 1241 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.95□□□□□ -1.94
USP47Q96K76 AL096829.2-201ENST00000446582 742 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 HMGN2P13-201ENST00000476476 274 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 AC087190.1-201ENST00000484462 480 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 MLLT10P2-201ENST00000506434 249 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.95□□□□□ -1.94
USP47Q96K76 AC105914.1-201ENST00000511798 226 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USP47Q96K76 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.95□□□□□ -1.94
USP47Q96K76 AADACP1-206ENST00000561502 1193 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 ZNF971P-201ENST00000562068 1249 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 COX6CP3-201ENST00000580869 223 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.95□□□□□ -1.94
USP47Q96K76 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.95□□□□□ -1.94
USP47Q96K76 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.95□□□□□ -1.94
USP47Q96K76 VIS1.1-201ENST00000610517 203 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms