Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RPL7P37-201ENST00000425095 738 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 RPL26P6-201ENST00000440913 438 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC005297.2-201ENST00000450430 606 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 CACYBPP2-201ENST00000453625 678 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC092798.1-201ENST00000458542 409 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 SNORA59A-201ENST00000459326 152 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC104164.3-201ENST00000467363 1258 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 RPL9P33-201ENST00000484311 566 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC113420.1-201ENST00000507903 571 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 RN7SKP31-201ENST00000516354 278 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 OR4K8P-201ENST00000578842 1048 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 MIR5708-201ENST00000579723 85 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 NRBF2P5-201ENST00000603087 788 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC069304.2-201ENST00000605154 435 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC080013.4-201ENST00000607624 649 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC124016.2-201ENST00000610058 665 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC023158.2-201ENST00000614876 543 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC025588.4-201ENST00000615802 908 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC140725.3-201ENST00000616193 880 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC027309.3-201ENST00000623419 351 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 MIR1322-201ENST00000638013 71 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.59□□□□□ -2
ECHDC3Q96DC8 AP005901.5-201ENST00000545779 1796 ntBASIC2.59□□□□□ -2
ECHDC3Q96DC8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ECHDC3Q96DC8 AC008568.2-201ENST00000623862 2313 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 U3.12-201ENST00000364498 214 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 UBE2V1P2-201ENST00000397758 440 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 USP9YP20-201ENST00000419224 558 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AL513175.2-201ENST00000422071 443 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC236972.1-201ENST00000433225 199 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC092573.2-201ENST00000434546 243 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC126182.1-201ENST00000478134 357 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 OR4G11P-201ENST00000492842 939 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC022483.1-201ENST00000514020 567 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.58□□□□□ -2
ECHDC3Q96DC8 RNU6-1028P-201ENST00000517164 93 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 MTCO1P47-201ENST00000523889 1271 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC024224.1-201ENST00000538284 609 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC123904.3-201ENST00000547218 814 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC004853.1-201ENST00000604902 698 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 RPL21P136-201ENST00000605378 396 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AL161734.1-201ENST00000609720 557 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 MIR6817-201ENST00000615588 66 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AL596245.1-201ENST00000618994 362 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC011330.2-201ENST00000621680 635 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
ECHDC3Q96DC8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ECHDC3Q96DC8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
ECHDC3Q96DC8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ECHDC3Q96DC8 AL136360.1-201ENST00000503377 1900 ntBASIC2.58□□□□□ -2
ECHDC3Q96DC8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 MIR27B-201ENST00000385129 97 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 RNU6-1197P-201ENST00000391183 107 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 SNRPEP2-201ENST00000397592 279 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AL356057.2-201ENST00000403318 432 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AL096701.2-201ENST00000416920 238 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AC092427.1-201ENST00000439177 601 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 MTND2P20-201ENST00000440805 661 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 OFD1P3Y-201ENST00000453312 783 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 AP000852.1-201ENST00000472460 573 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 UBE2DNL-203ENST00000474922 222 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 TMEM251P1-201ENST00000503717 318 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AC069306.1-201ENST00000507006 843 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AC087808.1-201ENST00000520501 361 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.57□□□□□ -2
ECHDC3Q96DC8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 HIGD1AP17-201ENST00000554576 276 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms