Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC093012.1-202ENST00000549403 582 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC034105.3-201ENST00000565294 442 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 MTCO3P24-201ENST00000572729 782 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 AL355816.2-201ENST00000610049 647 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC099778.2-201ENST00000610904 211 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC096577.2-201ENST00000611455 153 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC073308.1-201ENST00000623696 305 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 MIR7153-201ENST00000637758 57 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SKA1Q96BD8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 RNU6-500P-201ENST00000362349 107 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 RNU6-501P-201ENST00000364072 100 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 RNU5A-8P-201ENST00000364102 114 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 CD24P4-201ENST00000382840 243 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 RNU6-1027P-201ENST00000383998 107 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 CCNG1P1-201ENST00000406783 885 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 ATP5A1P2-201ENST00000412323 255 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 RPL17P12-201ENST00000413391 526 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC007919.1-201ENST00000429380 217 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 Z74696.2-201ENST00000436514 498 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 BMI1P1-201ENST00000445879 941 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC006480.1-201ENST00000449887 378 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC010468.1-201ENST00000461022 817 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 RAC1P2-201ENST00000511164 579 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 PHBP14-201ENST00000512887 367 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC010265.1-201ENST00000513509 211 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 Y_RNA.717-201ENST00000517106 92 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 LRRC34P1-201ENST00000542742 915 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC123904.3-201ENST00000547218 814 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AL121766.1-201ENST00000547436 487 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC006960.3-201ENST00000561845 705 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AL845331.3-202ENST00000562856 261 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AP000403.1-201ENST00000603349 851 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC004223.4-201ENST00000612426 332 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC090970.3-201ENST00000612566 866 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 AC079684.1-201ENST00000621405 437 ntBASIC3.72□□□□□ -1.81
SKA1Q96BD8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SKA1Q96BD8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SKA1Q96BD8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
SKA1Q96BD8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.81
SKA1Q96BD8 RNA5SP50-201ENST00000363731 107 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 MIR183-201ENST00000384958 110 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 RPS15AP6-201ENST00000420703 385 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC005005.2-201ENST00000420779 380 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 BX890604.2-201ENST00000427883 474 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 MTCO1P42-201ENST00000457379 726 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 snoU13.28-201ENST00000459235 104 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AL135752.1-201ENST00000479477 471 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 LARP1BP2-201ENST00000486594 519 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC074250.1-201ENST00000511117 192 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 RNU6-928P-201ENST00000516876 104 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 RN7SKP60-201ENST00000516985 239 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 RNU6-1003P-201ENST00000517099 105 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC100870.1-201ENST00000522035 505 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 DEFB108A-201ENST00000530110 222 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC012435.1-202ENST00000568772 240 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC090616.2-202ENST00000584248 222 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 MTCYBP22-201ENST00000603788 447 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 NUTF2P8-201ENST00000604593 363 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AL161756.2-201ENST00000604597 246 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AL161729.4-201ENST00000604650 476 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC004696.1-201ENST00000614345 607 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA1Q96BD8 AL161629.2-201ENST00000615347 275 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 SNHG22-203ENST00000617833 660 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SKA1Q96BD8 AC058791.1-201ENST00000608412 3198 ntBASIC3.71□□□□□ -1.82
SKA1Q96BD8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SKA1Q96BD8 Y_RNA.97-201ENST00000363094 102 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms