Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.37□□□□□ -1.87
TM9SF4Q92544 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.37□□□□□ -1.87
TM9SF4Q92544 MTCO1P24-201ENST00000515438 1558 ntBASIC3.37□□□□□ -1.87
TM9SF4Q92544 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.37□□□□□ -1.87
TM9SF4Q92544 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TM9SF4Q92544 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TM9SF4Q92544 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.37□□□□□ -1.87
TM9SF4Q92544 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TM9SF4Q92544 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TM9SF4Q92544 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TM9SF4Q92544 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TM9SF4Q92544 RIOK3P1-201ENST00000418778 1528 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 Y_RNA.46-201ENST00000362695 102 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 RNA5SP267-201ENST00000364893 126 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 RNA5SP189-201ENST00000364920 115 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 RNU6-339P-201ENST00000384310 107 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 RNU6-878P-201ENST00000384578 110 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 EI24P2-201ENST00000397776 1076 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 RPS3AP36-201ENST00000398190 775 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 MTND4LP20-201ENST00000402379 270 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 HSPE1P26-201ENST00000405341 275 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 RPS3AP3-201ENST00000411933 242 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 DNAJC19P4-201ENST00000440115 345 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 SDCBPP1-201ENST00000440192 890 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 RPL23AP33-201ENST00000442301 452 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 HMGB3P8-201ENST00000449709 577 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 AL033528.1-201ENST00000453780 140 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 RPL21P10-201ENST00000463521 490 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 RN7SL807P-201ENST00000470923 297 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC078785.3-201ENST00000476607 425 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 LARP1BP2-201ENST00000486594 519 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 RPS3AP50-201ENST00000487064 803 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 AP001025.2-201ENST00000490908 477 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 RN7SKP13-201ENST00000515933 244 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 RN7SKP298-201ENST00000515950 94 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 ZNF192P1-203ENST00000565888 810 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC010928.3-201ENST00000587712 541 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 HMGN1P30-201ENST00000589286 268 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 TPMTP1-201ENST00000592307 737 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 AP003465.2-201ENST00000602571 373 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC048347.1-201ENST00000624621 427 ntBASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
TM9SF4Q92544 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TM9SF4Q92544 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TM9SF4Q92544 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 SNORD9-201ENST00000362566 104 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 RNU6-989P-201ENST00000362756 107 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 RNU6-259P-201ENST00000383999 107 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 RPL7P25-201ENST00000404151 721 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 HMGB3P23-201ENST00000414981 585 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC005019.1-201ENST00000436455 431 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 MTND6P13-201ENST00000443510 523 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 SNRPFP4-201ENST00000456366 242 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC104563.1-201ENST00000476147 376 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 NDUFB4P2-201ENST00000509515 391 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 ARL2BPP6-201ENST00000512757 439 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 SNORA18.6-201ENST00000516792 115 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 RNU6-1003P-201ENST00000517099 105 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 RPL21P5-201ENST00000554662 472 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.35□□□□□ -1.87
TM9SF4Q92544 UBE2L4-201ENST00000587688 464 ntBASIC3.35□□□□□ -1.87
TM9SF4Q92544 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms