Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 RPL26P6-201ENST00000440913 438 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC016696.1-201ENST00000446949 318 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 C1DP4-201ENST00000455429 424 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 RN7SL585P-201ENST00000470538 280 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 RN7SL293P-201ENST00000481765 281 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 RPL23AP55-201ENST00000498163 452 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC025445.1-201ENST00000502728 300 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC074250.1-201ENST00000511117 192 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 SNRPGP16-201ENST00000533275 226 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AP004242.1-201ENST00000533701 349 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC016957.1-201ENST00000534895 309 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC087883.1-201ENST00000551882 391 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AL022154.1-201ENST00000604698 785 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 MIR98-201ENST00000606724 119 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC068792.1-201ENST00000621354 417 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AL773545.4-201ENST00000637262 310 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AL513478.4-201ENST00000641636 310 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 MAPK10-253ENST00000641010 4072 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.84□□□□□ -1.8
HMGB4Q8WW32 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.8
HMGB4Q8WW32 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMGB4Q8WW32 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 RNU6-511P-201ENST00000363496 107 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 RNU6-173P-201ENST00000364215 104 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 SNORA51.2-201ENST00000364595 132 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 RNA5SP51-201ENST00000364750 119 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 Y_RNA.296-201ENST00000364930 108 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 SNORA9-201ENST00000384215 133 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 MIR218-2-201ENST00000385006 110 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 RPS3AP44-201ENST00000425466 790 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 MTCO3P45-201ENST00000443036 613 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 CYCSP35-201ENST00000451978 304 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 SRRM1P2-201ENST00000464531 1192 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 RPL9P6-201ENST00000492764 598 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC114797.1-201ENST00000514003 728 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 IGKV2-38-201ENST00000517443 247 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC135001.1-201ENST00000544546 283 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC006960.3-201ENST00000561845 705 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AL355810.1-201ENST00000614629 552 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC026585.1-201ENST00000619582 524 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 MIR4275-201ENST00000636486 87 ntBASIC3.83□□□□□ -1.8
HMGB4Q8WW32 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGB4Q8WW32 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 RNU6-600P-201ENST00000362524 99 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 U3.11-201ENST00000364476 212 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 SNORA23-201ENST00000365128 182 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 RNU6-169P-201ENST00000365336 107 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 RNU6-282P-201ENST00000365357 103 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 MIR199A2-201ENST00000385289 110 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 RPL23AP48-201ENST00000406913 488 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 RPL21P24-201ENST00000413752 448 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 RPL21P66-201ENST00000426566 466 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 RPS3AP46-201ENST00000448352 682 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms