Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RPL23AP57-201ENST00000332361 466 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RNU1-75P-201ENST00000347264 129 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RNA5SP119-201ENST00000362715 117 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 Y_RNA.89-201ENST00000363031 102 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RNU6-534P-201ENST00000364877 106 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RNU6-761P-201ENST00000384148 107 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 SNORA51.6-201ENST00000384151 125 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 Y_RNA.573-201ENST00000384763 105 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 MIR1183-201ENST00000408856 89 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 OR51A5P-201ENST00000415429 942 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 MTCO1P20-201ENST00000425366 358 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 ISCA1P6-201ENST00000427740 390 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 HMGB3P11-201ENST00000440127 604 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RPL23AP16-201ENST00000441715 421 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 SNORA84-201ENST00000459229 133 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RBM43P1-201ENST00000476891 1081 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RN7SL293P-201ENST00000481765 281 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC091951.2-201ENST00000500762 203 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC024589.1-201ENST00000512207 263 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RNU6-875P-201ENST00000516488 106 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 CENPUP2-201ENST00000555897 1186 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RPL21P12-201ENST00000559810 515 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC090616.5-202ENST00000582111 297 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC005730.3-201ENST00000583067 366 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 PSMA6P4-201ENST00000603247 718 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 BNIP3P9-201ENST00000603714 553 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC063943.3-201ENST00000615562 356 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 SNORD39.4-201ENST00000620099 78 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC004009.2-201ENST00000623016 728 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AC034229.5-201ENST00000624258 185 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AL122126.1-201ENST00000546905 1318 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AL133412.1-201ENST00000380194 2992 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AL450326.2-201ENST00000421913 1962 ntBASIC3.58□□□□□ -1.84
LMO3Q8TAP4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LMO3Q8TAP4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 Y_RNA.1-201ENST00000352915 104 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 Y_RNA.61-201ENST00000362835 102 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 RNU1-85P-201ENST00000364127 164 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 Y_RNA.295-201ENST00000364918 102 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 RNU6-483P-201ENST00000384088 108 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 MIR23A-201ENST00000385245 73 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 RNU6-195P-201ENST00000411352 109 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 MTCO1P17-201ENST00000411522 491 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 BX323014.1-201ENST00000412876 237 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 SPA17P1-201ENST00000416656 452 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 NPM1P24-201ENST00000428039 894 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 ELOCP14-201ENST00000428070 331 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 MTCO2P11-201ENST00000431069 680 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 CYCSP43-201ENST00000438233 310 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 ELOCP7-201ENST00000439968 331 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AL354685.2-201ENST00000448218 1447 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC243772.1-201ENST00000451620 410 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 C1DP4-201ENST00000455429 424 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AP000852.1-201ENST00000472460 573 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC008628.2-201ENST00000502605 298 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 Y_RNA.693-201ENST00000516641 110 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 RNU6-201P-201ENST00000517100 61 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC104027.1-201ENST00000521887 300 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AP003181.2-201ENST00000528941 181 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC109635.3-201ENST00000529536 185 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 RAB11AP2-201ENST00000545905 639 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AL512310.1-201ENST00000548639 172 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC138915.3-201ENST00000562908 1389 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC025678.1-201ENST00000567861 338 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 MAGOH2P-202ENST00000584384 429 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms