Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL133383.2-201ENST00000622958 2336 ntBASIC4.1□□□□□ -1.75
CCDC33Q8N5R6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC33Q8N5R6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC33Q8N5R6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
CCDC33Q8N5R6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 SNORA73.2-201ENST00000364946 201 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 RNU6-1215P-201ENST00000384441 102 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 RN7SKP156-201ENST00000410308 342 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 MTCO1P21-201ENST00000416634 589 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC137499.1-201ENST00000427602 88 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC133104.1-201ENST00000429100 218 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AL358934.1-201ENST00000432346 324 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 VDAC1P3-201ENST00000434069 851 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 NOTCH2P1-201ENST00000443481 624 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 RANP8-201ENST00000444720 713 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 RPL23AP31-201ENST00000456160 467 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC008481.1-201ENST00000463278 396 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 RPS3AP17-201ENST00000472594 777 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC004924.1-201ENST00000480160 781 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC108860.1-201ENST00000484521 383 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 RN7SL323P-201ENST00000494712 295 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 VN1R104P-201ENST00000505115 1009 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC108078.1-201ENST00000508073 725 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 RNA5SP179-201ENST00000517284 121 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AP003072.2-201ENST00000527756 676 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 MIR3690-201ENST00000580266 75 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC091167.4-201ENST00000605079 184 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC004492.1-201ENST00000607036 742 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC138649.3-201ENST00000622154 254 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 FP236240.3-201ENST00000623061 327 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC068880.5-201ENST00000624331 290 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC005832.2-201ENST00000538921 1430 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 AC066616.2-201ENST00000559334 1481 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 OTUD4P1-201ENST00000237841 3067 ntBASIC4.09□□□□□ -1.75
CCDC33Q8N5R6 LINC02471-203ENST00000641941 4752 ntBASIC4.09□□□□□ -1.76
CCDC33Q8N5R6 MAPK10-372ENST00000641954 3413 ntBASIC4.09□□□□□ -1.76
CCDC33Q8N5R6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CCDC33Q8N5R6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC33Q8N5R6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 U3.11-201ENST00000364476 212 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 SNORA20.2-201ENST00000383922 131 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AC110754.1-201ENST00000399740 601 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 SNORA11.1-201ENST00000408133 129 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AF274854.1-201ENST00000413236 615 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 RPL21P24-201ENST00000413752 448 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 ELOCP4-201ENST00000420090 333 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 RPL7L1P8-201ENST00000469911 741 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 PPIAP15-201ENST00000479662 484 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 NIPA2P2-201ENST00000496376 1083 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AC068305.1-201ENST00000497406 726 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AC107401.1-201ENST00000503426 685 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 RNU6-352P-201ENST00000516908 107 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 MED28P6-201ENST00000558776 231 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 DEFB131E-202ENST00000602581 683 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AP001330.4-201ENST00000604350 154 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AL161734.1-201ENST00000609720 557 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AC004696.1-201ENST00000614345 607 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms