Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL355375.2-201ENST00000574825 175 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC010525.2-201ENST00000590920 195 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 YWHAQP7-201ENST00000603536 658 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC009248.2-201ENST00000619826 254 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 C2orf27A-204ENST00000623058 969 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC090617.10-201ENST00000624308 134 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC100810.6-201ENST00000638068 285 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC009229.4-201ENST00000623854 1947 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL645937.1-201ENST00000641739 1652 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 RNU6-28P-201ENST00000362378 107 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 MIR491-201ENST00000384877 84 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 RPL31P52-201ENST00000407532 367 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 SNORA3.3-201ENST00000408712 125 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 SYF2P2-201ENST00000417620 583 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 RPS12P5-201ENST00000423449 371 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL031736.2-201ENST00000426573 787 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL358472.1-201ENST00000431295 329 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL365400.1-201ENST00000431854 640 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC119618.1-201ENST00000434191 222 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 BNIP3P2-201ENST00000441221 577 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL356010.1-201ENST00000456364 102 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC103851.1-201ENST00000506833 274 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC104057.1-201ENST00000515547 497 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC090151.1-201ENST00000520784 730 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC107953.1-201ENST00000522216 297 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC100770.1-201ENST00000532310 322 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC091516.1-201ENST00000549191 703 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC025627.2-201ENST00000576220 160 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 MIR3146-201ENST00000580367 79 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 MIR3200-201ENST00000580767 85 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AL596245.1-201ENST00000618994 362 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC009318.4-201ENST00000620496 486 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 MIR1302-1-201ENST00000637932 143 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 PHKBP1-201ENST00000450951 1951 ntBASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SLC44A3Q8N4M1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.15□□□□□ -1.74
SLC44A3Q8N4M1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.15□□□□□ -1.74
SLC44A3Q8N4M1 MTND5P28-201ENST00000438005 1594 ntBASIC4.15□□□□□ -1.74
SLC44A3Q8N4M1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SLC44A3Q8N4M1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 RNA5SP391-201ENST00000363456 119 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.474-201ENST00000384341 102 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 RPL21P17-201ENST00000397467 475 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AL590004.1-201ENST00000405321 300 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 MTCO3P12-201ENST00000416718 547 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 SAR1AP4-201ENST00000429225 591 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms