Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AL133153.1-201ENST00000557756 303 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MIR3913-1-201ENST00000577744 102 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 VN1R79P-201ENST00000593540 513 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 U3.45-201ENST00000607547 219 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC098614.4-201ENST00000607601 462 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC013562.2-201ENST00000611632 603 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AL450472.3-201ENST00000615578 367 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 uc_338.12-201ENST00000616344 181 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AL603758.1-201ENST00000618654 241 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AC099842.1-201ENST00000619919 596 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 MIR4275-201ENST00000636486 87 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 DDX10P1-201ENST00000448545 1933 ntBASIC3.42□□□□□ -1.86
BEST3Q8N1M1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.42□□□□□ -1.86
BEST3Q8N1M1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 TAB3P1-202ENST00000452645 1634 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC007685.1-201ENST00000329806 452 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 MIR208A-201ENST00000362287 71 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 SNORA31-201ENST00000362607 130 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 RNU6-173P-201ENST00000364215 104 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 RNY4P16-201ENST00000364768 94 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 SNORA70.4-201ENST00000365509 134 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 Y_RNA.505-201ENST00000384489 102 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 HLFP1-201ENST00000402375 499 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 ISCA1P6-201ENST00000427740 390 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC119618.1-201ENST00000434191 222 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC090774.1-201ENST00000435925 246 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC093156.1-201ENST00000440382 670 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 MTCO2P29-201ENST00000465212 189 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC011825.1-201ENST00000484967 388 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 NIPA2P2-201ENST00000496376 1083 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC020893.1-201ENST00000502452 580 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC010587.1-201ENST00000505809 469 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 MTND2P33-201ENST00000506452 1031 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC004062.1-201ENST00000509926 645 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 DEFB108A-201ENST00000530110 222 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC245505.1-201ENST00000556398 224 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC009063.1-201ENST00000563342 702 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 FAM60BP-201ENST00000578364 658 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 MIR3922-201ENST00000585192 84 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC245014.2-201ENST00000603689 287 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC246785.4-201ENST00000605374 287 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC005332.10-201ENST00000612725 619 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AC084757.4-201ENST00000616350 526 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AL360181.4-201ENST00000621752 134 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 MTND5P29-201ENST00000458676 1807 ntBASIC3.41□□□□□ -1.86
BEST3Q8N1M1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST3Q8N1M1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.4□□□□□ -1.86
BEST3Q8N1M1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
BEST3Q8N1M1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
BEST3Q8N1M1 SNORA51.2-201ENST00000364595 132 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 RNU6-259P-201ENST00000383999 107 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 RNU6-192P-201ENST00000391253 100 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AL109755.1-201ENST00000401791 649 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 RPS3AP24-201ENST00000407896 734 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 ELOCP17-201ENST00000414751 326 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC019097.1-201ENST00000424783 735 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AL136380.1-201ENST00000447970 162 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 AC006480.1-201ENST00000449887 378 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.4□□□□□ -1.87
BEST3Q8N1M1 snoU13.4-201ENST00000458916 104 ntBASIC3.4□□□□□ -1.87
BEST3Q8N1M1 TMED11P-201ENST00000479478 690 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms