Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AL021368.2-201ENST00000606125 5352 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AL365440.1-201ENST00000436135 2167 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 AL353746.1-201ENST00000566293 6881 ntBASIC3.93□□□□□ -1.78
VPS52Q8N1B4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VPS52Q8N1B4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 Y_RNA.517-201ENST00000384551 106 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AL583834.1-201ENST00000406943 343 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 HSPE1P8-201ENST00000406997 288 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 RNU4-78P-201ENST00000410940 126 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 BX842559.1-201ENST00000419615 532 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC245054.1-201ENST00000420944 258 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AL158156.1-201ENST00000422509 473 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 HMGB1P12-201ENST00000438594 598 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AL049734.2-201ENST00000441066 616 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC112653.1-201ENST00000443851 386 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 ELOCP30-201ENST00000447108 299 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 MTND1P9-201ENST00000453775 944 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 RPL32P34-201ENST00000486380 400 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 RANP9-201ENST00000519957 271 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC103843.2-201ENST00000530523 682 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC090578.1-201ENST00000604955 591 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC011816.2-201ENST00000607089 556 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AL355472.4-201ENST00000610233 626 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC005332.10-201ENST00000612725 619 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AL590099.1-201ENST00000615276 138 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC092628.2-201ENST00000622492 339 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 AC011460.1-201ENST00000636268 1834 ntBASIC3.92□□□□□ -1.78
VPS52Q8N1B4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
VPS52Q8N1B4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 Y_RNA.599-201ENST00000410489 109 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 RPL22P17-201ENST00000438729 315 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 RPL17P49-201ENST00000443728 411 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC006480.1-201ENST00000449887 378 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 BX510359.1-201ENST00000456973 237 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 KLF3P2-201ENST00000465138 268 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 RN7SKP298-201ENST00000515950 94 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 RN7SKP209-201ENST00000516888 304 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC022616.6-201ENST00000520479 119 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AL157394.1-201ENST00000562983 1224 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 HMGN1P30-201ENST00000589286 268 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 OR10AB1P-201ENST00000609613 938 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC091304.9-201ENST00000612091 226 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC008250.2-201ENST00000615261 205 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC079597.1-201ENST00000624306 508 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AP000553.6-201ENST00000641242 118 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AC092447.7-201ENST00000422212 1621 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS52Q8N1B4 AL049781.1-201ENST00000623195 3585 ntBASIC3.91□□□□□ -1.78
VPS52Q8N1B4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms