Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX5Q8N196 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.5□□□□□ -1.53
SIX5Q8N196 RNU7-4P-201ENST00000516961 62 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.5□□□□□ -1.53
SIX5Q8N196 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.5□□□□□ -1.53
SIX5Q8N196 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.5□□□□□ -1.53
SIX5Q8N196 AC068790.4-201ENST00000602474 263 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.5□□□□□ -1.53
SIX5Q8N196 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.5□□□□□ -1.53
SIX5Q8N196 MIR4272-201ENST00000635924 64 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX5Q8N196 IRF5P1-201ENST00000504852 2164 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 AC008669.1-201ENST00000565823 2178 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 AC239868.2-201ENST00000564237 4527 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.5□□□□□ -1.53
SIX5Q8N196 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SIX5Q8N196 AC104260.2-201ENST00000623551 3497 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
SIX5Q8N196 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SIX5Q8N196 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SIX5Q8N196 MTND5P7-201ENST00000413558 1798 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SIX5Q8N196 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 RNU6-398P-201ENST00000384143 109 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 Y_RNA.461-201ENST00000384263 103 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 RNU6-1179P-201ENST00000384667 107 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 RNA5SP91-201ENST00000390902 119 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 RNU6-1156P-201ENST00000410365 100 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 RNU6-607P-201ENST00000411283 108 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 AC108032.1-201ENST00000416706 207 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 AL451062.2-201ENST00000427515 271 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.49□□□□□ -1.53
SIX5Q8N196 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.49□□□□□ -1.53
SIX5Q8N196 AL583843.1-201ENST00000456070 346 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 RPL23AP2-201ENST00000471227 466 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 AC008716.1-201ENST00000511084 513 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 RNU6-1143P-201ENST00000516125 104 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 SNORA40.14-201ENST00000516543 86 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.49□□□□□ -1.53
SIX5Q8N196 AC040926.1-201ENST00000530195 238 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 AC034102.8-201ENST00000615146 484 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.49□□□□□ -1.53
SIX5Q8N196 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SIX5Q8N196 AC073869.8-201ENST00000641806 335 ntBASIC5.49□□□□□ -1.53
SIX5Q8N196 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.49□□□□□ -1.53
SIX5Q8N196 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX5Q8N196 MTND5P27-201ENST00000428871 1720 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 AL360270.2-201ENST00000562952 5985 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 AL078621.3-201ENST00000623707 2042 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.48□□□□□ -1.53
SIX5Q8N196 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SIX5Q8N196 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SIX5Q8N196 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 RN7SKP224-201ENST00000364140 325 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 Y_RNA.526-201ENST00000384572 110 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 Y_RNA.534-201ENST00000384599 112 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 MIR600-201ENST00000385007 98 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SIX5Q8N196 RNU6-174P-201ENST00000410406 106 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 OR2AM1P-201ENST00000422137 422 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 CRIP1P1-201ENST00000427567 185 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 TMEM183AP1-205ENST00000432739 290 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 RPL21P2-201ENST00000440049 481 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 KNOP1P3-201ENST00000446933 426 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 OR1H1P-201ENST00000448731 937 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 MTCO3P8-201ENST00000453691 755 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.48□□□□□ -1.53
SIX5Q8N196 RN7SL354P-201ENST00000469282 294 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 AC022447.4-201ENST00000504053 364 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.48□□□□□ -1.53
SIX5Q8N196 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.48□□□□□ -1.53
SIX5Q8N196 RNU2-53P-201ENST00000516257 147 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 RNA5SP373-201ENST00000517271 95 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 IGHV3-76-201ENST00000522465 295 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 AC012339.2-201ENST00000523996 453 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.48□□□□□ -1.53
SIX5Q8N196 AL121603.1-201ENST00000553815 142 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 AC068446.3-201ENST00000555285 382 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 MIR4270-201ENST00000581799 70 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 AC209154.1-201ENST00000582156 337 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.48□□□□□ -1.53
SIX5Q8N196 AC078899.3-201ENST00000599065 212 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.48□□□□□ -1.53
SIX5Q8N196 Z99571.1-201ENST00000636677 394 ntBASIC5.48□□□□□ -1.53
SIX5Q8N196 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SIX5Q8N196 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms